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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni
Consensus:19.1 nTPM
HPA:19.1 nTPM
GTEx:19.3 nTPM
FANTOM5:39.3 Scaled Tags Per Million
Pig:21.3 nTPM
Mouse:59.2 nTPM
Allen mouse:10.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030827Antibody HPA030829
Glial cells Not detectedMedium
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.1
Sample id Sample description nTPM
Hippocampus
nTPM: 18.9
1898 Male, age 80, left hemisphere 20.4
2621 Female, age 67, right hemisphere 19.6
2148 Female, age 91, left hemisphere 19.1
1855 Male, age 76, left hemisphere 18.4
2529 Female, age 94, left hemisphere 18.4
1911 Female, age 85, right hemisphere 17.5
Dentate gyrus
nTPM: 18.4
2530 Female, age 94, left hemisphere 19.6
1927 Female, age 91, both hemispheres 19.5
2010 Male, age 76, both hemispheres 19.1
2528 Male, age 74, both hemispheres 18.2
2246 Female, age 85, both hemispheres 17.2
2531 Female, age 67, both hemispheres 17.0
Entorhinal gyrus
nTPM: 18.1
2613 Female, age 94, left hemisphere 19.0
2117 Female, age 91, right hemisphere 18.4
1787 Male, age 76, left hemisphere 18.3
1938 Female, age 85, left hemisphere 18.3
2764 Male, age 80, right hemisphere 18.2
2686 Male, age 75, right hemisphere 16.5
Hippocampus, CA1
nTPM: 19.1
2749 Male, age 80, left hemisphere 22.5
1873 Female, age 85, both hemispheres 19.3
2527 Male, age 74, both hemispheres 19.0
2045 Male, age 76, both hemispheres 17.4
2082 Female, age 91, right hemisphere 17.1
Hippocampus, CA2
nTPM: 19.0
1963 Male, age 80, left hemisphere 20.3
1892 Male, age 76, both hemispheres 19.8
2437 Female, age 94, left hemisphere 19.3
2249 Male, age 74, both hemispheres 18.9
1940 Female, age 85, left hemisphere 18.6
2113 Female, age 91, right hemisphere 17.2
Hippocampus, CA3
nTPM: 18.7
2137 Male, age 80, left hemisphere 20.7
1867 Male, age 76, both hemispheres 19.4
2620 Female, age 94, left hemisphere 18.6
2436 Male, age 74, both hemispheres 18.0
1891 Female, age 85, both hemispheres 17.8
2861 Female, age 67, both hemispheres 17.6
Parahippocampal cortex
nTPM: 18.0
2250 Female, age 67, right hemisphere 19.1
1990 Female, age 91, right hemisphere 18.6
1850 Male, age 80, both hemispheres 18.5
2245 Female, age 91, both hemispheres 18.5
2692 Male, age 74, both hemispheres 18.4
1933 Female, age 85, both hemispheres 17.9
2532 Female, age 72, left hemisphere 17.6
2018 Male, age 76, both hemispheres 17.5
2622 Female, age 67, right hemisphere 16.9
2693 Female, age 94, both hemispheres 16.9
Perirhinal gyrus
nTPM: 18.6
1841 Female, age 85, right hemisphere 19.6
1847 Female, age 91, left hemisphere 19.0
1794 Male, age 80, right hemisphere 18.9
2521 Female, age 94, right hemisphere 18.6
2848 Male, age 76, right hemisphere 16.8
Subiculum
nTPM: 18.4
1901 Male, age 80, both hemispheres 18.8
2438 Female, age 94, left hemisphere 18.7
2042 Male, age 76, both hemispheres 18.6
2619 Male, age 74, both hemispheres 18.5
1977 Female, age 85, both hemispheres 18.4
2729 Female, age 91, right hemisphere 17.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.3
Samples: 197

Max nTPM: 52.8
Min nTPM: 13.1
Std nTPM: 3.9
Median nTPM: 18.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 52.8
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 32.1
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 31.0
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 29.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 28.7
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 28.5
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 27.3
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 26.8
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 25.7
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 24.5
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 24.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 39.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 39.3
FF:10169-103B7 60 years, female 39.7
FF:10153-102I9 76 years, female 38.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.3
Samples: 4

Max nTPM: 27.0
Min nTPM: 15.9
Sample A Female 27.0
Sample B Female 21.8
Sample C Male 20.3
Sample D Male 15.9
Entorhinal cortex
nTPM: 20.5
Samples: 4

Max nTPM: 23.2
Min nTPM: 18.1
Sample A Female 23.2
Sample B Female 21.0
Sample C Male 19.7
Sample D Male 18.1
Subiculum
nTPM: 18.0
Samples: 4

Max nTPM: 23.8
Min nTPM: 16.0
Sample A Female 23.8
Sample B Female 16.0
Sample C Male 16.1
Sample D Male 16.2
Ventral hippocampus
nTPM: 19.3
Samples: 4

Max nTPM: 22.6
Min nTPM: 13.6
Sample A Female 18.5
Sample B Female 13.6
Sample C Male 22.5
Sample D Male 22.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 59.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 59.2
Samples: 4

Max nTPM: 66.2
Min nTPM: 55.7
Sample A Male 56.7
Sample B Male 58.3
Sample C Female 55.7
Sample D Female 66.2
Hippocampal formation
nTPM: 55.3
Samples: 4

Max nTPM: 57.5
Min nTPM: 52.1
Sample A Male 56.5
Sample B Male 55.0
Sample C Female 57.5
Sample D Female 52.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.2
69079980 Antisense, RP_050324_01_A07, Mouse strain C57BL/6J (56 days, male) 10.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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