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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:87.5 nTPM
HPA:87.5 nTPM
GTEx:67.6 nTPM
FANTOM5:36.2 Scaled Tags Per Million
Pig:37.1 nTPM
Mouse:318.8 nTPM
Allen mouse:23.5 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 87.5
Sample id Sample description nTPM
Hippocampus
nTPM: 65.7
1855 Male, age 76, left hemisphere 82.9
1911 Female, age 85, right hemisphere 74.2
1898 Male, age 80, left hemisphere 67.7
2621 Female, age 67, right hemisphere 64.1
2148 Female, age 91, left hemisphere 56.4
2529 Female, age 94, left hemisphere 49.1
Dentate gyrus
nTPM: 68.7
1927 Female, age 91, both hemispheres 87.3
2530 Female, age 94, left hemisphere 72.2
2010 Male, age 76, both hemispheres 72.1
2246 Female, age 85, both hemispheres 71.7
2531 Female, age 67, both hemispheres 55.9
2528 Male, age 74, both hemispheres 53.1
Entorhinal gyrus
nTPM: 44.3
1938 Female, age 85, left hemisphere 66.8
2613 Female, age 94, left hemisphere 55.9
1787 Male, age 76, left hemisphere 43.5
2764 Male, age 80, right hemisphere 39.5
2686 Male, age 75, right hemisphere 32.2
2117 Female, age 91, right hemisphere 28.0
Hippocampus, CA1
nTPM: 87.5
2749 Male, age 80, left hemisphere 121.1
1873 Female, age 85, both hemispheres 99.0
2045 Male, age 76, both hemispheres 92.8
2527 Male, age 74, both hemispheres 67.2
2082 Female, age 91, right hemisphere 57.4
Hippocampus, CA2
nTPM: 60.9
1892 Male, age 76, both hemispheres 78.9
2249 Male, age 74, both hemispheres 64.5
1963 Male, age 80, left hemisphere 64.4
1940 Female, age 85, left hemisphere 56.2
2113 Female, age 91, right hemisphere 52.9
2437 Female, age 94, left hemisphere 48.6
Hippocampus, CA3
nTPM: 73.6
2137 Male, age 80, left hemisphere 111.1
2861 Female, age 67, both hemispheres 85.6
1867 Male, age 76, both hemispheres 74.7
2620 Female, age 94, left hemisphere 68.3
1891 Female, age 85, both hemispheres 52.7
2436 Male, age 74, both hemispheres 49.3
Parahippocampal cortex
nTPM: 46.4
2018 Male, age 76, both hemispheres 75.5
2245 Female, age 91, both hemispheres 59.6
1933 Female, age 85, both hemispheres 58.7
2250 Female, age 67, right hemisphere 51.1
1850 Male, age 80, both hemispheres 43.7
2693 Female, age 94, both hemispheres 37.0
2692 Male, age 74, both hemispheres 35.7
2532 Female, age 72, left hemisphere 34.9
2622 Female, age 67, right hemisphere 34.4
1990 Female, age 91, right hemisphere 33.8
Perirhinal gyrus
nTPM: 51.4
1847 Female, age 91, left hemisphere 65.7
2521 Female, age 94, right hemisphere 62.6
1841 Female, age 85, right hemisphere 44.3
1794 Male, age 80, right hemisphere 44.2
2848 Male, age 76, right hemisphere 40.0
Subiculum
nTPM: 44.8
2042 Male, age 76, both hemispheres 60.4
1901 Male, age 80, both hemispheres 56.9
1977 Female, age 85, both hemispheres 52.2
2729 Female, age 91, right hemisphere 45.0
2619 Male, age 74, both hemispheres 32.0
2438 Female, age 94, left hemisphere 22.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 67.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 67.6
Samples: 197

Max nTPM: 203.3
Min nTPM: 10.4
Std nTPM: 37.3
Median nTPM: 60.7
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 203.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 193.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 168.5
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 158.3
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 157.3
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 151.2
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 149.8
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 148.6
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 148.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 146.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 143.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 36.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 36.2
FF:10169-103B7 60 years, female 42.9
FF:10153-102I9 76 years, female 29.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 37.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 35.0
Samples: 4

Max nTPM: 44.8
Min nTPM: 27.0
Sample A Female 44.8
Sample B Female 40.8
Sample C Male 27.0
Sample D Male 27.4
Entorhinal cortex
nTPM: 37.1
Samples: 4

Max nTPM: 41.8
Min nTPM: 26.9
Sample A Female 40.1
Sample B Female 39.4
Sample C Male 41.8
Sample D Male 26.9
Subiculum
nTPM: 26.7
Samples: 4

Max nTPM: 34.2
Min nTPM: 24.0
Sample A Female 34.2
Sample B Female 24.0
Sample C Male 24.5
Sample D Male 24.1
Ventral hippocampus
nTPM: 28.2
Samples: 4

Max nTPM: 38.1
Min nTPM: 20.9
Sample A Female 26.4
Sample B Female 20.9
Sample C Male 27.4
Sample D Male 38.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 318.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 202.3
Samples: 4

Max nTPM: 224.5
Min nTPM: 187.3
Sample A Male 189.2
Sample B Male 187.3
Sample C Female 224.5
Sample D Female 208.0
Hippocampal formation
nTPM: 318.8
Samples: 4

Max nTPM: 349.3
Min nTPM: 273.8
Sample A Male 316.5
Sample B Male 335.6
Sample C Female 349.3
Sample D Female 273.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 23.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 23.5
583559 Antisense, RP_040831_02_H08, Mouse strain C57BL/6J (56 days, male) 23.5

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The Human Protein Atlas

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