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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:60.4 nTPM
HPA:60.4 nTPM
GTEx:46.3 nTPM
FANTOM5:345.5 Scaled Tags Per Million
Pig:93.0 nTPM
Mouse:151.4 nTPM
Allen mouse:9.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB022625
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 60.4
Sample id Sample description nTPM
Hippocampus
nTPM: 36.5
1898 Male, age 80, left hemisphere 42.8
1911 Female, age 85, right hemisphere 42.5
2621 Female, age 67, right hemisphere 38.8
2148 Female, age 91, left hemisphere 34.6
2529 Female, age 94, left hemisphere 32.3
1855 Male, age 76, left hemisphere 28.1
Dentate gyrus
nTPM: 31.9
1927 Female, age 91, both hemispheres 59.2
2528 Male, age 74, both hemispheres 30.2
2010 Male, age 76, both hemispheres 28.9
2246 Female, age 85, both hemispheres 28.3
2531 Female, age 67, both hemispheres 25.8
2530 Female, age 94, left hemisphere 18.9
Entorhinal gyrus
nTPM: 40.6
1938 Female, age 85, left hemisphere 60.4
2613 Female, age 94, left hemisphere 47.7
2764 Male, age 80, right hemisphere 42.6
1787 Male, age 76, left hemisphere 37.5
2686 Male, age 75, right hemisphere 33.5
2117 Female, age 91, right hemisphere 21.7
Hippocampus, CA1
nTPM: 55.9
2749 Male, age 80, left hemisphere 125.8
2527 Male, age 74, both hemispheres 52.3
1873 Female, age 85, both hemispheres 43.8
2082 Female, age 91, right hemisphere 36.6
2045 Male, age 76, both hemispheres 21.2
Hippocampus, CA2
nTPM: 42.2
1892 Male, age 76, both hemispheres 55.9
1963 Male, age 80, left hemisphere 47.2
2249 Male, age 74, both hemispheres 45.5
2113 Female, age 91, right hemisphere 36.4
1940 Female, age 85, left hemisphere 35.1
2437 Female, age 94, left hemisphere 32.8
Hippocampus, CA3
nTPM: 51.9
2137 Male, age 80, left hemisphere 128.0
2436 Male, age 74, both hemispheres 43.2
2620 Female, age 94, left hemisphere 41.8
1867 Male, age 76, both hemispheres 41.3
1891 Female, age 85, both hemispheres 31.1
2861 Female, age 67, both hemispheres 25.7
Parahippocampal cortex
nTPM: 48.8
1850 Male, age 80, both hemispheres 73.0
2693 Female, age 94, both hemispheres 63.6
1933 Female, age 85, both hemispheres 51.9
2245 Female, age 91, both hemispheres 51.5
1990 Female, age 91, right hemisphere 47.9
2622 Female, age 67, right hemisphere 43.3
2250 Female, age 67, right hemisphere 42.4
2532 Female, age 72, left hemisphere 41.9
2692 Male, age 74, both hemispheres 40.5
2018 Male, age 76, both hemispheres 32.0
Perirhinal gyrus
nTPM: 60.4
1841 Female, age 85, right hemisphere 73.0
1794 Male, age 80, right hemisphere 71.7
1847 Female, age 91, left hemisphere 54.5
2521 Female, age 94, right hemisphere 51.5
2848 Male, age 76, right hemisphere 51.1
Subiculum
nTPM: 37.9
1901 Male, age 80, both hemispheres 53.1
2438 Female, age 94, left hemisphere 39.4
1977 Female, age 85, both hemispheres 38.1
2619 Male, age 74, both hemispheres 36.0
2729 Female, age 91, right hemisphere 31.6
2042 Male, age 76, both hemispheres 28.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 46.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.3
Samples: 197

Max nTPM: 100.9
Min nTPM: 13.2
Std nTPM: 18.5
Median nTPM: 42.3
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 100.9
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 99.3
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 97.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 91.7
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 91.4
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 89.5
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 89.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 88.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 85.7
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 80.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 80.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 345.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 345.5
FF:10169-103B7 60 years, female 469.8
FF:10153-102I9 76 years, female 221.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 93.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 93.0
Samples: 4

Max nTPM: 117.2
Min nTPM: 76.8
Sample A Female 117.2
Sample B Female 98.5
Sample C Male 76.8
Sample D Male 79.4
Entorhinal cortex
nTPM: 85.6
Samples: 4

Max nTPM: 95.4
Min nTPM: 76.3
Sample A Female 89.4
Sample B Female 95.4
Sample C Male 76.3
Sample D Male 81.2
Subiculum
nTPM: 64.3
Samples: 4

Max nTPM: 84.6
Min nTPM: 55.7
Sample A Female 84.6
Sample B Female 60.7
Sample C Male 56.1
Sample D Male 55.7
Ventral hippocampus
nTPM: 74.5
Samples: 4

Max nTPM: 88.1
Min nTPM: 58.3
Sample A Female 83.6
Sample B Female 58.3
Sample C Male 67.9
Sample D Male 88.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 151.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 151.4
Samples: 4

Max nTPM: 163.6
Min nTPM: 137.4
Sample A Male 146.7
Sample B Male 158.0
Sample C Female 137.4
Sample D Female 163.6
Hippocampal formation
nTPM: 147.9
Samples: 4

Max nTPM: 163.8
Min nTPM: 131.0
Sample A Male 146.7
Sample B Male 150.2
Sample C Female 163.8
Sample D Female 131.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.0
70946134 Antisense, RP_050303_02_G06, Mouse strain C57BL/6J (56 days, male) 18.0
70795415 Antisense, RP_050712_01_E07, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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