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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:19.6 nTPM
HPA:19.6 nTPM
GTEx:15.3 nTPM
FANTOM5:14.0 Scaled Tags Per Million
Mouse:162.9 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044556Antibody HPA062427
Glial cells LowMedium
Neuronal cells MediumHigh




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 19.6
Sample id Sample description nTPM
Hippocampus
nTPM: 18.3
1855 Male, age 76, left hemisphere 19.9
1911 Female, age 85, right hemisphere 18.9
2621 Female, age 67, right hemisphere 18.3
2148 Female, age 91, left hemisphere 18.1
1898 Male, age 80, left hemisphere 17.2
2529 Female, age 94, left hemisphere 17.2
Dentate gyrus
nTPM: 18.4
2010 Male, age 76, both hemispheres 20.3
2531 Female, age 67, both hemispheres 18.7
2528 Male, age 74, both hemispheres 18.6
2246 Female, age 85, both hemispheres 18.0
1927 Female, age 91, both hemispheres 17.6
2530 Female, age 94, left hemisphere 17.1
Entorhinal gyrus
nTPM: 18.2
2117 Female, age 91, right hemisphere 19.3
1787 Male, age 76, left hemisphere 18.8
2686 Male, age 75, right hemisphere 18.6
1938 Female, age 85, left hemisphere 18.5
2764 Male, age 80, right hemisphere 17.9
2613 Female, age 94, left hemisphere 15.9
Hippocampus, CA1
nTPM: 18.6
2527 Male, age 74, both hemispheres 20.6
2045 Male, age 76, both hemispheres 19.0
2082 Female, age 91, right hemisphere 18.3
1873 Female, age 85, both hemispheres 18.1
2749 Male, age 80, left hemisphere 17.2
Hippocampus, CA2
nTPM: 18.4
1940 Female, age 85, left hemisphere 20.9
1892 Male, age 76, both hemispheres 18.7
1963 Male, age 80, left hemisphere 18.7
2249 Male, age 74, both hemispheres 18.6
2113 Female, age 91, right hemisphere 17.8
2437 Female, age 94, left hemisphere 15.7
Hippocampus, CA3
nTPM: 19.2
1891 Female, age 85, both hemispheres 21.4
2137 Male, age 80, left hemisphere 20.4
2436 Male, age 74, both hemispheres 19.1
2620 Female, age 94, left hemisphere 18.4
1867 Male, age 76, both hemispheres 18.1
2861 Female, age 67, both hemispheres 17.7
Parahippocampal cortex
nTPM: 18.0
1990 Female, age 91, right hemisphere 19.8
1850 Male, age 80, both hemispheres 19.0
2532 Female, age 72, left hemisphere 18.7
2018 Male, age 76, both hemispheres 18.5
2245 Female, age 91, both hemispheres 18.4
2693 Female, age 94, both hemispheres 18.0
2692 Male, age 74, both hemispheres 17.5
1933 Female, age 85, both hemispheres 17.3
2622 Female, age 67, right hemisphere 16.7
2250 Female, age 67, right hemisphere 16.1
Perirhinal gyrus
nTPM: 19.6
1847 Female, age 91, left hemisphere 20.2
2848 Male, age 76, right hemisphere 19.8
2521 Female, age 94, right hemisphere 19.7
1794 Male, age 80, right hemisphere 19.2
1841 Female, age 85, right hemisphere 19.0
Subiculum
nTPM: 19.0
1901 Male, age 80, both hemispheres 20.5
1977 Female, age 85, both hemispheres 20.4
2729 Female, age 91, right hemisphere 20.1
2619 Male, age 74, both hemispheres 18.5
2042 Male, age 76, both hemispheres 17.6
2438 Female, age 94, left hemisphere 16.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 15.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 15.3
Samples: 197

Max nTPM: 35.1
Min nTPM: 5.4
Std nTPM: 4.1
Median nTPM: 14.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 35.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 27.5
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 26.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 26.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 24.6
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 23.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 23.6
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 23.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 23.3
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 22.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 22.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.0
FF:10169-103B7 60 years, female 16.7
FF:10153-102I9 76 years, female 11.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 162.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 162.9
Samples: 4

Max nTPM: 177.2
Min nTPM: 149.8
Sample A Male 152.4
Sample B Male 177.2
Sample C Female 172.3
Sample D Female 149.8
Hippocampal formation
nTPM: 159.7
Samples: 4

Max nTPM: 172.1
Min nTPM: 151.1
Sample A Male 172.1
Sample B Male 151.1
Sample C Female 162.7
Sample D Female 152.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
69782151 Antisense, RP_050505_02_D09, Mouse strain C57BL/6J (56 days, male) 0.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.