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KLHL2
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:50.9 nTPM
HPA:50.9 nTPM
GTEx:51.0 nTPM
FANTOM5:110.1 Scaled Tags Per Million
Pig:57.0 nTPM
Mouse:200.3 nTPM
Allen mouse:14.8 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 50.9
Sample id Sample description nTPM
Caudate nucleus
nTPM: 46.7
1857 Female, age 85, left hemisphere 59.8
2846 Female, age 79, unknown 54.2
2290 Female, age 72, unknown 51.4
1854 Male, age 80, left hemisphere 48.6
1781 Male, age 74, unknown 46.1
2481 Female, age 94, left hemisphere 39.0
2288 Male, age 75, left hemisphere 38.0
2289 Male, age 61, right hemisphere 36.6
Claustrum
nTPM: 42.4
2392 Female, age 94, both hemispheres 47.9
2196 Female, age 79, unknown 47.8
1956 Male, age 74, unknown 46.6
2491 Male, age 75, both hemispheres 43.3
2292 Female, age 85, both hemispheres 43.2
2198 Male, age 80, both hemispheres 42.4
2568 Male, age 61, both hemispheres 41.2
2284 Female, age 91, both hemispheres 35.2
2645 Female, age 72, unknown 33.8
Globus pallidus, externus
nTPM: 38.9
2395 Male, age 75, both hemispheres 46.1
2646 Male, age 61, right hemisphere 38.8
2567 Female, age 72, unknown 38.2
1996 Male, age 80, right hemisphere 36.3
2772 Female, age 79, unknown 35.2
Globus pallidus, internus
nTPM: 41.1
2483 Female, age 94, right hemisphere 50.4
2287 Male, age 75, right hemisphere 48.1
2111 Female, age 85, right hemisphere 41.7
2778 Female, age 91, both hemispheres 38.1
2566 Female, age 72, unknown 37.9
1818 Male, age 74, unknown 36.3
2037 Male, age 80, right hemisphere 35.3
Nucleus accumbens
nTPM: 50.9
1856 Female, age 91, right hemisphere 60.6
1783 Male, age 74, unknown 60.5
2824 Male, age 61, right hemisphere 59.8
1806 Female, age 85, left hemisphere 59.6
2698 Female, age 72, unknown 52.9
2391 Female, age 94, left hemisphere 42.3
2286 Male, age 75, left hemisphere 37.1
2732 Male, age 80, right hemisphere 34.4
Nucleus basalis of Meynert
nTPM: 42.0
2393 Male, age 80, right hemisphere 47.4
2484 Female, age 94, left hemisphere 42.9
2569 Male, age 61, both hemispheres 39.5
2821 Male, age 75, both hemispheres 38.2
Nucleus of the diagonal band
nTPM: 36.9
2029 Male, age 61, right hemisphere 39.2
2775 Male, age 80, right hemisphere 39.1
1812 Female, age 91, both hemispheres 37.2
1979 Male, age 74, unknown 35.8
2195 Female, age 85, both hemispheres 33.1
Olfactory tubercle
nTPM: 34.4
1846 Male, age 80, right hemisphere 39.3
1998 Female, age 91, both hemispheres 37.3
2487 Female, age 94, left hemisphere 30.8
2856 Male, age 75, right hemisphere 30.1
Putamen
nTPM: 49.4
1838 Male, age 80, right hemisphere 58.9
1937 Female, age 91, right hemisphere 53.2
2466 Female, age 79, unknown 52.0
1829 Male, age 74, unknown 51.7
2647 Male, age 75, left hemisphere 46.4
2489 Female, age 72, unknown 42.1
2482 Female, age 94, left hemisphere 41.3
Septal nuclei
nTPM: 31.5
2031 Female, age 72, unknown 41.9
1960 Male, age 74, unknown 34.4
2009 Female, age 91, both hemispheres 30.9
2629 Female, age 94, right hemisphere 30.9
2394 Male, age 61, left hemisphere 30.6
2059 Female, age 85, both hemispheres 26.7
2199 Male, age 80, right hemisphere 25.0

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 51.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 42.6
Samples: 246

Max nTPM: 135.0
Min nTPM: 16.1
Std nTPM: 16.7
Median nTPM: 38.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 135.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 94.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 93.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 92.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 90.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 85.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 84.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 81.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 80.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 80.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 79.8
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 51.0
Samples: 246

Max nTPM: 109.1
Min nTPM: 14.1
Std nTPM: 18.4
Median nTPM: 50.6
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 109.1
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 103.6
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 90.7
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 88.2
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 87.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 87.4
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 87.1
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 85.9
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 84.6
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 84.2
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 83.2
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Brain - Putamen (basal ganglia)
Average nTPM: 46.4
Samples: 205

Max nTPM: 104.4
Min nTPM: 14.5
Std nTPM: 14.4
Median nTPM: 44.4
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 104.4
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 102.3
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 96.8
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 92.3
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 89.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 81.0
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 78.3
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 76.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 73.1
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 71.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 70.1
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 110.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 101.0
FF:10164-103B2 76 years, female 101.0
Globus pallidus
Scaled Tags Per Million: 103.5
FF:10175-103C4 60 years, female 107.3
FF:10161-103A8 76 years, female 99.7
Nucleus accumbens
Scaled Tags Per Million: 94.9
FF:10037-101F1 23-56 years, mixed 94.9
Putamen
Scaled Tags Per Million: 110.1
FF:10176-103C5 60 years, female 110.1

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 57.0
Pig sample Sample description nTPM
Caudate
nTPM: 57.0
Samples: 4

Max nTPM: 68.2
Min nTPM: 51.6
Sample A Female 56.5
Sample B Female 51.6
Sample C Male 68.2
Sample D Male 51.6
Putamen
nTPM: 52.3
Samples: 4

Max nTPM: 73.2
Min nTPM: 38.1
Sample A Female 38.1
Sample B Female 46.1
Sample C Male 73.2
Sample D Male 51.7
Septum
nTPM: 35.1
Samples: 4

Max nTPM: 52.2
Min nTPM: 17.8
Sample A Female 52.2
Sample B Female 50.9
Sample C Male 17.8
Sample D Male 19.5
Ventral pallidum
nTPM: 49.7
Samples: 4

Max nTPM: 61.2
Min nTPM: 25.8
Sample A Female 61.2
Sample B Female 58.0
Sample C Male 25.8
Sample D Male 53.6

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 200.3
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 200.3
Samples: 4

Max nTPM: 205.0
Min nTPM: 191.0
Sample A Male 204.5
Sample B Male 205.0
Sample C Female 200.8
Sample D Female 191.0
Septum
nTPM: 77.9
Samples: 4

Max nTPM: 88.3
Min nTPM: 70.7
Sample A Male 73.0
Sample B Male 70.7
Sample C Female 79.6
Sample D Female 88.3
Ventral forebrain
nTPM: 134.5
Samples: 4

Max nTPM: 138.8
Min nTPM: 125.3
Sample A Male 138.3
Sample B Male 125.3
Sample C Female 138.8
Sample D Female 135.4

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 14.8
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 14.8
73584837 Antisense, RP_051206_01_C05, Mouse strain C57BL/6J (56 days, male) 14.8
Pallidum
Expression energy: 8.5
73584837 Antisense, RP_051206_01_C05, Mouse strain C57BL/6J (56 days, male) 8.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.