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KLHL5
BASAL GANGLIA - Expression summary
Protein expression
Caudatei
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:53.8 nTPM
HPA:53.8 nTPM
GTEx:39.0 nTPM
FANTOM5:94.2 Scaled Tags Per Million
Pig:23.9 nTPM
Mouse:44.1 nTPM
Allen mouse:0.9 Expression energy

CAUDATE - Antibody stainingi
Antibody HPA013958
Glial cells Medium
Neuronal cells Medium



BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 53.8
Sample id Sample description nTPM
Caudate nucleus
nTPM: 39.6
2481 Female, age 94, left hemisphere 43.6
2288 Male, age 75, left hemisphere 41.8
2846 Female, age 79, unknown 40.6
1857 Female, age 85, left hemisphere 39.8
1854 Male, age 80, left hemisphere 38.6
2290 Female, age 72, unknown 38.4
1781 Male, age 74, unknown 37.4
2289 Male, age 61, right hemisphere 36.4
Claustrum
nTPM: 39.7
2392 Female, age 94, both hemispheres 46.3
1956 Male, age 74, unknown 43.8
2292 Female, age 85, both hemispheres 43.6
2491 Male, age 75, both hemispheres 42.6
2196 Female, age 79, unknown 38.1
2198 Male, age 80, both hemispheres 35.8
2284 Female, age 91, both hemispheres 35.7
2645 Female, age 72, unknown 35.5
2568 Male, age 61, both hemispheres 35.3
Globus pallidus, externus
nTPM: 53.8
2646 Male, age 61, right hemisphere 58.9
2567 Female, age 72, unknown 57.6
1996 Male, age 80, right hemisphere 53.6
2772 Female, age 79, unknown 49.5
2395 Male, age 75, both hemispheres 49.3
Globus pallidus, internus
nTPM: 52.5
2483 Female, age 94, right hemisphere 67.2
2111 Female, age 85, right hemisphere 52.4
2037 Male, age 80, right hemisphere 50.4
2287 Male, age 75, right hemisphere 50.0
2566 Female, age 72, unknown 50.0
2778 Female, age 91, both hemispheres 49.1
1818 Male, age 74, unknown 48.5
Nucleus accumbens
nTPM: 39.1
2391 Female, age 94, left hemisphere 43.1
2698 Female, age 72, unknown 42.5
2286 Male, age 75, left hemisphere 41.7
2732 Male, age 80, right hemisphere 41.4
1806 Female, age 85, left hemisphere 38.9
1783 Male, age 74, unknown 35.9
1856 Female, age 91, right hemisphere 35.5
2824 Male, age 61, right hemisphere 33.7
Nucleus basalis of Meynert
nTPM: 49.0
2569 Male, age 61, both hemispheres 64.7
2484 Female, age 94, left hemisphere 45.8
2393 Male, age 80, right hemisphere 43.5
2821 Male, age 75, both hemispheres 41.8
Nucleus of the diagonal band
nTPM: 38.4
1812 Female, age 91, both hemispheres 40.8
1979 Male, age 74, unknown 38.8
2775 Male, age 80, right hemisphere 38.6
2029 Male, age 61, right hemisphere 37.8
2195 Female, age 85, both hemispheres 36.0
Olfactory tubercle
nTPM: 39.3
1846 Male, age 80, right hemisphere 42.6
2856 Male, age 75, right hemisphere 39.8
2487 Female, age 94, left hemisphere 37.4
1998 Female, age 91, both hemispheres 37.3
Putamen
nTPM: 40.9
2647 Male, age 75, left hemisphere 47.2
2489 Female, age 72, unknown 43.3
2482 Female, age 94, left hemisphere 42.8
1829 Male, age 74, unknown 42.2
2466 Female, age 79, unknown 38.1
1937 Female, age 91, right hemisphere 37.8
1838 Male, age 80, right hemisphere 35.1
Septal nuclei
nTPM: 40.3
2394 Male, age 61, left hemisphere 44.8
2199 Male, age 80, right hemisphere 43.3
2059 Female, age 85, both hemispheres 40.1
1960 Male, age 74, unknown 39.2
2009 Female, age 91, both hemispheres 39.0
2629 Female, age 94, right hemisphere 38.0
2031 Female, age 72, unknown 37.4

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 39.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 31.1
Samples: 246

Max nTPM: 95.9
Min nTPM: 12.8
Std nTPM: 12.5
Median nTPM: 29.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 95.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 85.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 71.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 70.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 61.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 61.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 61.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 60.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 59.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 59.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 58.2
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 25.1
Samples: 246

Max nTPM: 81.0
Min nTPM: 7.7
Std nTPM: 12.5
Median nTPM: 21.2
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 81.0
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 77.7
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 72.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 66.4
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 64.8
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 61.0
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 58.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 55.1
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 54.3
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 53.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 52.2
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Brain - Putamen (basal ganglia)
Average nTPM: 39.0
Samples: 205

Max nTPM: 113.2
Min nTPM: 13.3
Std nTPM: 18.0
Median nTPM: 36.4
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 113.2
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 111.6
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 97.6
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 95.6
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 92.4
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 85.9
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 85.1
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 81.8
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 78.3
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 76.1
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 75.1
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 94.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 48.2
FF:10164-103B2 76 years, female 48.2
Globus pallidus
Scaled Tags Per Million: 94.2
FF:10161-103A8 76 years, female 108.7
FF:10175-103C4 60 years, female 79.7
Nucleus accumbens
Scaled Tags Per Million: 55.8
FF:10037-101F1 23-56 years, mixed 55.8
Putamen
Scaled Tags Per Million: 48.3
FF:10176-103C5 60 years, female 48.3

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 23.9
Pig sample Sample description nTPM
Caudate
nTPM: 22.5
Samples: 4

Max nTPM: 25.4
Min nTPM: 20.0
Sample A Female 25.4
Sample B Female 22.9
Sample C Male 21.6
Sample D Male 20.0
Putamen
nTPM: 24.0
Samples: 4

Max nTPM: 31.7
Min nTPM: 19.2
Sample A Female 22.0
Sample B Female 22.9
Sample C Male 31.7
Sample D Male 19.2
Septum
nTPM: 22.2
Samples: 4

Max nTPM: 25.6
Min nTPM: 18.5
Sample A Female 25.6
Sample B Female 24.3
Sample C Male 18.5
Sample D Male 20.2
Ventral pallidum
nTPM: 21.7
Samples: 4

Max nTPM: 24.8
Min nTPM: 17.4
Sample A Female 24.8
Sample B Female 24.4
Sample C Male 20.2
Sample D Male 17.4

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 44.1
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 43.8
Samples: 4

Max nTPM: 45.0
Min nTPM: 42.3
Sample A Male 43.9
Sample B Male 43.9
Sample C Female 42.3
Sample D Female 45.0
Septum
nTPM: 44.1
Samples: 4

Max nTPM: 46.6
Min nTPM: 38.1
Sample A Male 38.1
Sample B Male 46.6
Sample C Female 45.2
Sample D Female 46.3
Ventral forebrain
nTPM: 38.1
Samples: 4

Max nTPM: 39.1
Min nTPM: 36.3
Sample A Male 38.4
Sample B Male 38.5
Sample C Female 39.1
Sample D Female 36.3

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 0.7
77800943 Antisense, RP_070219_01_B07, Mouse strain C57BL/6J (56 days, male) 1.1
67815553 Antisense, RP_040920_02_A02, Mouse strain C57BL/6J (56 days, male) 0.4
Pallidum
Expression energy: 0.9
77800943 Antisense, RP_070219_01_B07, Mouse strain C57BL/6J (56 days, male) 1.3
67815553 Antisense, RP_040920_02_A02, Mouse strain C57BL/6J (56 days, male) 0.5

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.