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FAM149A
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:28.7 nTPM
HPA:28.7 nTPM
GTEx:25.2 nTPM
FANTOM5:13.3 Scaled Tags Per Million
Pig:32.1 nTPM
Mouse:16.3 nTPM
Allen mouse:0.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA055004
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.7
Sample id Sample description nTPM
Hippocampus
nTPM: 26.9
1855 Male, age 76, left hemisphere 30.5
2148 Female, age 91, left hemisphere 29.1
2621 Female, age 67, right hemisphere 27.4
1898 Male, age 80, left hemisphere 27.2
2529 Female, age 94, left hemisphere 24.0
1911 Female, age 85, right hemisphere 23.3
Dentate gyrus
nTPM: 26.8
2010 Male, age 76, both hemispheres 30.3
2531 Female, age 67, both hemispheres 28.8
2530 Female, age 94, left hemisphere 27.7
1927 Female, age 91, both hemispheres 26.8
2246 Female, age 85, both hemispheres 24.6
2528 Male, age 74, both hemispheres 23.0
Entorhinal gyrus
nTPM: 22.4
1938 Female, age 85, left hemisphere 23.2
2117 Female, age 91, right hemisphere 22.8
1787 Male, age 76, left hemisphere 22.7
2613 Female, age 94, left hemisphere 22.4
2686 Male, age 75, right hemisphere 22.1
2764 Male, age 80, right hemisphere 21.0
Hippocampus, CA1
nTPM: 27.8
2045 Male, age 76, both hemispheres 36.2
2749 Male, age 80, left hemisphere 31.5
1873 Female, age 85, both hemispheres 25.0
2082 Female, age 91, right hemisphere 23.6
2527 Male, age 74, both hemispheres 22.5
Hippocampus, CA2
nTPM: 25.0
1892 Male, age 76, both hemispheres 28.8
1963 Male, age 80, left hemisphere 28.7
2437 Female, age 94, left hemisphere 26.3
1940 Female, age 85, left hemisphere 23.0
2113 Female, age 91, right hemisphere 23.0
2249 Male, age 74, both hemispheres 20.4
Hippocampus, CA3
nTPM: 28.7
1867 Male, age 76, both hemispheres 33.6
2620 Female, age 94, left hemisphere 33.0
2137 Male, age 80, left hemisphere 32.2
2861 Female, age 67, both hemispheres 29.8
1891 Female, age 85, both hemispheres 23.3
2436 Male, age 74, both hemispheres 20.7
Parahippocampal cortex
nTPM: 22.2
2250 Female, age 67, right hemisphere 25.7
2018 Male, age 76, both hemispheres 24.6
1933 Female, age 85, both hemispheres 23.7
2245 Female, age 91, both hemispheres 23.4
2693 Female, age 94, both hemispheres 22.4
1990 Female, age 91, right hemisphere 21.2
2532 Female, age 72, left hemisphere 20.7
2622 Female, age 67, right hemisphere 20.4
1850 Male, age 80, both hemispheres 20.3
2692 Male, age 74, both hemispheres 19.3
Perirhinal gyrus
nTPM: 22.2
1847 Female, age 91, left hemisphere 23.1
1841 Female, age 85, right hemisphere 22.8
2521 Female, age 94, right hemisphere 22.5
1794 Male, age 80, right hemisphere 21.4
2848 Male, age 76, right hemisphere 21.0
Subiculum
nTPM: 24.0
2042 Male, age 76, both hemispheres 27.0
2729 Female, age 91, right hemisphere 26.3
1901 Male, age 80, both hemispheres 25.4
1977 Female, age 85, both hemispheres 22.9
2619 Male, age 74, both hemispheres 21.4
2438 Female, age 94, left hemisphere 20.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 25.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 25.2
Samples: 197

Max nTPM: 65.4
Min nTPM: 4.6
Std nTPM: 11.0
Median nTPM: 23.6
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 65.4
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 58.8
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 56.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 53.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 52.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 51.4
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 49.7
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 49.1
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 46.2
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 46.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 45.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 13.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 13.3
FF:10169-103B7 60 years, female 14.6
FF:10153-102I9 76 years, female 12.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 32.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 29.1
Samples: 4

Max nTPM: 32.9
Min nTPM: 20.3
Sample A Female 32.7
Sample B Female 30.4
Sample C Male 32.9
Sample D Male 20.3
Entorhinal cortex
nTPM: 28.6
Samples: 4

Max nTPM: 34.5
Min nTPM: 24.0
Sample A Female 24.0
Sample B Female 34.5
Sample C Male 30.5
Sample D Male 25.4
Subiculum
nTPM: 32.1
Samples: 4

Max nTPM: 40.6
Min nTPM: 26.2
Sample A Female 40.6
Sample B Female 34.1
Sample C Male 27.4
Sample D Male 26.2
Ventral hippocampus
nTPM: 29.1
Samples: 4

Max nTPM: 31.7
Min nTPM: 27.3
Sample A Female 28.2
Sample B Female 27.3
Sample C Male 29.3
Sample D Male 31.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.3
Samples: 4

Max nTPM: 18.7
Min nTPM: 15.3
Sample A Male 15.5
Sample B Male 15.6
Sample C Female 15.3
Sample D Female 18.7
Hippocampal formation
nTPM: 11.3
Samples: 4

Max nTPM: 13.8
Min nTPM: 9.4
Sample A Male 13.8
Sample B Male 10.0
Sample C Female 9.4
Sample D Female 11.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.5
100146089 Antisense, RP_110421_02_C03, Mouse strain C57BL/6J (56 days, male) 0.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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