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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:9.5 nTPM
HPA:9.5 nTPM
GTEx:13.0 nTPM
FANTOM5:61.8 Scaled Tags Per Million
Pig:9.0 nTPM
Mouse:12.8 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB025364
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 9.5
Sample id Sample description nTPM
Hippocampus
nTPM: 7.8
1911 Female, age 85, right hemisphere 10.4
2621 Female, age 67, right hemisphere 8.6
1855 Male, age 76, left hemisphere 8.4
2148 Female, age 91, left hemisphere 7.7
1898 Male, age 80, left hemisphere 7.0
2529 Female, age 94, left hemisphere 4.6
Dentate gyrus
nTPM: 8.2
1927 Female, age 91, both hemispheres 10.7
2246 Female, age 85, both hemispheres 9.4
2531 Female, age 67, both hemispheres 8.7
2528 Male, age 74, both hemispheres 7.0
2010 Male, age 76, both hemispheres 6.9
2530 Female, age 94, left hemisphere 6.4
Entorhinal gyrus
nTPM: 8.1
2613 Female, age 94, left hemisphere 12.0
1938 Female, age 85, left hemisphere 9.0
1787 Male, age 76, left hemisphere 8.4
2117 Female, age 91, right hemisphere 7.9
2686 Male, age 75, right hemisphere 6.7
2764 Male, age 80, right hemisphere 4.6
Hippocampus, CA1
nTPM: 7.9
2045 Male, age 76, both hemispheres 9.2
2082 Female, age 91, right hemisphere 8.2
1873 Female, age 85, both hemispheres 8.1
2527 Male, age 74, both hemispheres 7.9
2749 Male, age 80, left hemisphere 5.9
Hippocampus, CA2
nTPM: 7.9
1940 Female, age 85, left hemisphere 11.0
2113 Female, age 91, right hemisphere 8.9
2437 Female, age 94, left hemisphere 7.7
2249 Male, age 74, both hemispheres 7.6
1892 Male, age 76, both hemispheres 7.4
1963 Male, age 80, left hemisphere 4.7
Hippocampus, CA3
nTPM: 8.2
2620 Female, age 94, left hemisphere 10.6
1891 Female, age 85, both hemispheres 8.8
1867 Male, age 76, both hemispheres 8.3
2436 Male, age 74, both hemispheres 7.7
2137 Male, age 80, left hemisphere 7.2
2861 Female, age 67, both hemispheres 6.7
Parahippocampal cortex
nTPM: 9.5
2693 Female, age 94, both hemispheres 13.8
2250 Female, age 67, right hemisphere 13.4
2622 Female, age 67, right hemisphere 10.2
2532 Female, age 72, left hemisphere 10.0
2692 Male, age 74, both hemispheres 9.0
1933 Female, age 85, both hemispheres 8.6
2245 Female, age 91, both hemispheres 8.5
1990 Female, age 91, right hemisphere 7.6
1850 Male, age 80, both hemispheres 7.4
2018 Male, age 76, both hemispheres 6.5
Perirhinal gyrus
nTPM: 8.9
2521 Female, age 94, right hemisphere 11.5
2848 Male, age 76, right hemisphere 10.3
1841 Female, age 85, right hemisphere 9.5
1847 Female, age 91, left hemisphere 7.2
1794 Male, age 80, right hemisphere 6.1
Subiculum
nTPM: 7.8
2729 Female, age 91, right hemisphere 10.6
2042 Male, age 76, both hemispheres 7.8
2619 Male, age 74, both hemispheres 7.6
1977 Female, age 85, both hemispheres 7.3
1901 Male, age 80, both hemispheres 7.2
2438 Female, age 94, left hemisphere 6.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.0
Samples: 197

Max nTPM: 90.3
Min nTPM: 2.6
Std nTPM: 8.8
Median nTPM: 10.8
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 90.3
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 53.0
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 47.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 33.4
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 31.7
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 30.4
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 29.7
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 28.9
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 28.1
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 27.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 24.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 61.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 61.8
FF:10169-103B7 60 years, female 74.2
FF:10153-102I9 76 years, female 49.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 9.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 6.2
Samples: 4

Max nTPM: 7.9
Min nTPM: 4.5
Sample A Female 4.5
Sample B Female 5.4
Sample C Male 6.8
Sample D Male 7.9
Entorhinal cortex
nTPM: 8.9
Samples: 4

Max nTPM: 11.5
Min nTPM: 7.0
Sample A Female 11.5
Sample B Female 7.0
Sample C Male 8.5
Sample D Male 8.4
Subiculum
nTPM: 9.0
Samples: 4

Max nTPM: 12.6
Min nTPM: 6.3
Sample A Female 7.1
Sample B Female 6.3
Sample C Male 9.9
Sample D Male 12.6
Ventral hippocampus
nTPM: 6.6
Samples: 4

Max nTPM: 7.6
Min nTPM: 6.1
Sample A Female 6.4
Sample B Female 7.6
Sample C Male 6.1
Sample D Male 6.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.0
Samples: 4

Max nTPM: 9.9
Min nTPM: 7.5
Sample A Male 8.5
Sample B Male 7.5
Sample C Female 9.9
Sample D Female 9.9
Hippocampal formation
nTPM: 12.8
Samples: 4

Max nTPM: 15.0
Min nTPM: 10.5
Sample A Male 10.5
Sample B Male 11.3
Sample C Female 14.5
Sample D Female 15.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
69608220 Antisense, RP_050426_03_G05, Mouse strain C57BL/6J (56 days, male) 0.3

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The Human Protein Atlas

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