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ZBTB16
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:9.9 nTPM
HPA:9.9 nTPM
GTEx:6.8 nTPM
FANTOM5:97.4 Scaled Tags Per Million
Pig:26.2 nTPM
Mouse:13.8 nTPM
Allen mouse:10.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001499Antibody CAB004540
Glial cells Not detectedLow
Neuronal cells MediumLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 9.9
Sample id Sample description nTPM
Hippocampus
nTPM: 6.2
2529 Female, age 94, left hemisphere 9.5
2148 Female, age 91, left hemisphere 9.4
2621 Female, age 67, right hemisphere 8.5
1911 Female, age 85, right hemisphere 5.4
1898 Male, age 80, left hemisphere 3.7
1855 Male, age 76, left hemisphere 0.6
Dentate gyrus
nTPM: 8.9
2531 Female, age 67, both hemispheres 24.8
2010 Male, age 76, both hemispheres 12.4
1927 Female, age 91, both hemispheres 5.2
2528 Male, age 74, both hemispheres 4.2
2246 Female, age 85, both hemispheres 4.1
2530 Female, age 94, left hemisphere 2.6
Entorhinal gyrus
nTPM: 4.2
2764 Male, age 80, right hemisphere 12.4
2686 Male, age 75, right hemisphere 9.3
2117 Female, age 91, right hemisphere 3.0
1787 Male, age 76, left hemisphere 0.3
1938 Female, age 85, left hemisphere 0.3
2613 Female, age 94, left hemisphere 0.0
Hippocampus, CA1
nTPM: 4.5
2045 Male, age 76, both hemispheres 9.8
1873 Female, age 85, both hemispheres 8.3
2749 Male, age 80, left hemisphere 2.6
2082 Female, age 91, right hemisphere 2.0
2527 Male, age 74, both hemispheres 0.0
Hippocampus, CA2
nTPM: 2.5
2437 Female, age 94, left hemisphere 6.6
1963 Male, age 80, left hemisphere 5.5
2113 Female, age 91, right hemisphere 1.6
2249 Male, age 74, both hemispheres 1.5
1892 Male, age 76, both hemispheres 0.0
1940 Female, age 85, left hemisphere 0.0
Hippocampus, CA3
nTPM: 9.9
2620 Female, age 94, left hemisphere 23.3
2861 Female, age 67, both hemispheres 19.6
1891 Female, age 85, both hemispheres 7.5
2436 Male, age 74, both hemispheres 6.3
2137 Male, age 80, left hemisphere 3.0
1867 Male, age 76, both hemispheres 0.0
Parahippocampal cortex
nTPM: 5.4
2622 Female, age 67, right hemisphere 13.6
2018 Male, age 76, both hemispheres 10.2
2693 Female, age 94, both hemispheres 9.9
2532 Female, age 72, left hemisphere 6.1
1990 Female, age 91, right hemisphere 3.9
1933 Female, age 85, both hemispheres 2.8
2245 Female, age 91, both hemispheres 2.6
2692 Male, age 74, both hemispheres 2.4
1850 Male, age 80, both hemispheres 2.3
2250 Female, age 67, right hemisphere 0.0
Perirhinal gyrus
nTPM: 3.7
1841 Female, age 85, right hemisphere 8.2
1794 Male, age 80, right hemisphere 5.5
2848 Male, age 76, right hemisphere 4.8
1847 Female, age 91, left hemisphere 0.0
2521 Female, age 94, right hemisphere 0.0
Subiculum
nTPM: 4.6
2042 Male, age 76, both hemispheres 8.8
2729 Female, age 91, right hemisphere 6.0
1901 Male, age 80, both hemispheres 4.5
1977 Female, age 85, both hemispheres 4.4
2619 Male, age 74, both hemispheres 4.1
2438 Female, age 94, left hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 6.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.8
Samples: 197

Max nTPM: 24.3
Min nTPM: 0.9
Std nTPM: 4.2
Median nTPM: 5.9
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 24.3
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 24.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 23.0
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 21.1
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 18.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 16.9
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 16.3
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 15.6
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 15.5
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 15.3
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 14.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 97.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 97.4
FF:10153-102I9 76 years, female 116.4
FF:10169-103B7 60 years, female 78.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 20.6
Samples: 4

Max nTPM: 24.7
Min nTPM: 17.3
Sample A Female 21.1
Sample B Female 24.7
Sample C Male 19.3
Sample D Male 17.3
Entorhinal cortex
nTPM: 21.2
Samples: 4

Max nTPM: 24.5
Min nTPM: 19.1
Sample A Female 19.1
Sample B Female 19.6
Sample C Male 21.5
Sample D Male 24.5
Subiculum
nTPM: 16.7
Samples: 4

Max nTPM: 22.8
Min nTPM: 10.4
Sample A Female 17.9
Sample B Female 15.7
Sample C Male 22.8
Sample D Male 10.4
Ventral hippocampus
nTPM: 26.2
Samples: 4

Max nTPM: 36.6
Min nTPM: 20.6
Sample A Female 23.6
Sample B Female 20.6
Sample C Male 36.6
Sample D Male 23.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 13.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 13.1
Samples: 4

Max nTPM: 14.8
Min nTPM: 11.7
Sample A Male 11.7
Sample B Male 12.3
Sample C Female 13.4
Sample D Female 14.8
Hippocampal formation
nTPM: 13.8
Samples: 4

Max nTPM: 15.7
Min nTPM: 11.0
Sample A Male 11.0
Sample B Male 14.8
Sample C Female 13.6
Sample D Female 15.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.9
71717125 Antisense, RP_050510_02_F02, Mouse strain C57BL/6J (56 days, male) 10.9
69817091 Antisense, RP_050510_02_F02, Mouse strain C57BL/6J (56 days, male) 10.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.