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FNBP4
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:5.7 nTPM
HPA:5.7 nTPM
GTEx:16.0 nTPM
FANTOM5:67.8 Scaled Tags Per Million
Pig:21.1 nTPM
Mouse:9.2 nTPM
Allen mouse:7.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039485Antibody HPA040029
Glial cells Not detectedLow
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 5.7
Sample id Sample description nTPM
Hippocampus
nTPM: 5.2
1911 Female, age 85, right hemisphere 5.8
2148 Female, age 91, left hemisphere 5.7
2529 Female, age 94, left hemisphere 5.4
2621 Female, age 67, right hemisphere 5.3
1855 Male, age 76, left hemisphere 4.8
1898 Male, age 80, left hemisphere 4.2
Dentate gyrus
nTPM: 5.7
2531 Female, age 67, both hemispheres 7.2
2528 Male, age 74, both hemispheres 6.0
2246 Female, age 85, both hemispheres 5.7
2010 Male, age 76, both hemispheres 5.3
2530 Female, age 94, left hemisphere 5.1
1927 Female, age 91, both hemispheres 4.6
Entorhinal gyrus
nTPM: 5.2
2613 Female, age 94, left hemisphere 5.7
1787 Male, age 76, left hemisphere 5.6
2117 Female, age 91, right hemisphere 5.3
2686 Male, age 75, right hemisphere 5.3
2764 Male, age 80, right hemisphere 5.3
1938 Female, age 85, left hemisphere 4.3
Hippocampus, CA1
nTPM: 5.2
2045 Male, age 76, both hemispheres 6.6
2527 Male, age 74, both hemispheres 5.2
2082 Female, age 91, right hemisphere 5.1
1873 Female, age 85, both hemispheres 4.9
2749 Male, age 80, left hemisphere 4.4
Hippocampus, CA2
nTPM: 5.1
2113 Female, age 91, right hemisphere 6.0
1940 Female, age 85, left hemisphere 5.4
1963 Male, age 80, left hemisphere 5.2
2249 Male, age 74, both hemispheres 5.1
1892 Male, age 76, both hemispheres 4.5
2437 Female, age 94, left hemisphere 4.4
Hippocampus, CA3
nTPM: 5.5
2620 Female, age 94, left hemisphere 7.1
1891 Female, age 85, both hemispheres 5.4
2861 Female, age 67, both hemispheres 5.3
1867 Male, age 76, both hemispheres 5.2
2137 Male, age 80, left hemisphere 5.1
2436 Male, age 74, both hemispheres 5.1
Parahippocampal cortex
nTPM: 5.6
2532 Female, age 72, left hemisphere 6.4
2245 Female, age 91, both hemispheres 6.1
2622 Female, age 67, right hemisphere 6.1
1990 Female, age 91, right hemisphere 6.0
2018 Male, age 76, both hemispheres 5.9
2250 Female, age 67, right hemisphere 5.3
1850 Male, age 80, both hemispheres 5.1
2692 Male, age 74, both hemispheres 5.1
2693 Female, age 94, both hemispheres 5.1
1933 Female, age 85, both hemispheres 5.0
Perirhinal gyrus
nTPM: 5.3
2521 Female, age 94, right hemisphere 6.3
1841 Female, age 85, right hemisphere 5.3
1794 Male, age 80, right hemisphere 5.0
2848 Male, age 76, right hemisphere 5.0
1847 Female, age 91, left hemisphere 4.9
Subiculum
nTPM: 5.3
2042 Male, age 76, both hemispheres 5.8
2729 Female, age 91, right hemisphere 5.8
1977 Female, age 85, both hemispheres 5.4
2619 Male, age 74, both hemispheres 5.4
1901 Male, age 80, both hemispheres 5.0
2438 Female, age 94, left hemisphere 4.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.0
Samples: 197

Max nTPM: 33.4
Min nTPM: 4.3
Std nTPM: 4.4
Median nTPM: 15.8
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 33.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 33.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 32.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 31.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 29.1
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 27.3
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 26.9
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 25.5
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 25.1
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 25.0
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 24.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 67.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 67.8
FF:10169-103B7 60 years, female 76.3
FF:10153-102I9 76 years, female 59.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.2
Samples: 4

Max nTPM: 21.3
Min nTPM: 14.4
Sample A Female 14.4
Sample B Female 17.9
Sample C Male 19.2
Sample D Male 21.3
Entorhinal cortex
nTPM: 21.1
Samples: 4

Max nTPM: 24.7
Min nTPM: 19.1
Sample A Female 20.7
Sample B Female 19.8
Sample C Male 19.1
Sample D Male 24.7
Subiculum
nTPM: 20.6
Samples: 4

Max nTPM: 22.7
Min nTPM: 17.3
Sample A Female 17.3
Sample B Female 20.5
Sample C Male 22.7
Sample D Male 21.9
Ventral hippocampus
nTPM: 19.4
Samples: 4

Max nTPM: 22.4
Min nTPM: 18.0
Sample A Female 18.7
Sample B Female 22.4
Sample C Male 18.0
Sample D Male 18.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.2
Samples: 4

Max nTPM: 10.0
Min nTPM: 8.0
Sample A Male 10.0
Sample B Male 9.8
Sample C Female 9.0
Sample D Female 8.0
Hippocampal formation
nTPM: 8.9
Samples: 4

Max nTPM: 9.6
Min nTPM: 7.3
Sample A Male 9.5
Sample B Male 9.6
Sample C Female 7.3
Sample D Female 9.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.5
69672539 Antisense, RP_050428_04_A03, Mouse strain C57BL/6J (56 days, male) 7.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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