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ARHGEF17
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:29.6 nTPM
HPA:29.6 nTPM
GTEx:13.3 nTPM
FANTOM5:27.0 Scaled Tags Per Million
Pig:35.8 nTPM
Mouse:61.0 nTPM
Allen mouse:14.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007991
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 29.6
Sample id Sample description nTPM
Hippocampus
nTPM: 25.4
2148 Female, age 91, left hemisphere 39.7
1898 Male, age 80, left hemisphere 29.1
1855 Male, age 76, left hemisphere 26.9
2621 Female, age 67, right hemisphere 21.9
2529 Female, age 94, left hemisphere 21.2
1911 Female, age 85, right hemisphere 13.5
Dentate gyrus
nTPM: 29.6
2528 Male, age 74, both hemispheres 36.5
1927 Female, age 91, both hemispheres 36.3
2531 Female, age 67, both hemispheres 30.2
2530 Female, age 94, left hemisphere 28.5
2246 Female, age 85, both hemispheres 24.3
2010 Male, age 76, both hemispheres 21.8
Entorhinal gyrus
nTPM: 27.5
2686 Male, age 75, right hemisphere 37.0
2613 Female, age 94, left hemisphere 35.6
1938 Female, age 85, left hemisphere 24.4
2764 Male, age 80, right hemisphere 24.2
1787 Male, age 76, left hemisphere 23.7
2117 Female, age 91, right hemisphere 19.9
Hippocampus, CA1
nTPM: 21.4
2045 Male, age 76, both hemispheres 29.4
1873 Female, age 85, both hemispheres 26.4
2527 Male, age 74, both hemispheres 20.1
2082 Female, age 91, right hemisphere 20.0
2749 Male, age 80, left hemisphere 11.0
Hippocampus, CA2
nTPM: 26.1
1963 Male, age 80, left hemisphere 34.3
1892 Male, age 76, both hemispheres 32.6
2437 Female, age 94, left hemisphere 28.1
1940 Female, age 85, left hemisphere 24.0
2113 Female, age 91, right hemisphere 19.8
2249 Male, age 74, both hemispheres 17.7
Hippocampus, CA3
nTPM: 23.9
2620 Female, age 94, left hemisphere 39.1
2861 Female, age 67, both hemispheres 38.1
2436 Male, age 74, both hemispheres 21.0
1891 Female, age 85, both hemispheres 19.9
1867 Male, age 76, both hemispheres 16.9
2137 Male, age 80, left hemisphere 8.4
Parahippocampal cortex
nTPM: 23.4
2622 Female, age 67, right hemisphere 33.6
2692 Male, age 74, both hemispheres 29.7
1850 Male, age 80, both hemispheres 25.8
1990 Female, age 91, right hemisphere 25.2
2532 Female, age 72, left hemisphere 23.5
2693 Female, age 94, both hemispheres 20.8
1933 Female, age 85, both hemispheres 20.6
2250 Female, age 67, right hemisphere 18.9
2018 Male, age 76, both hemispheres 18.1
2245 Female, age 91, both hemispheres 17.7
Perirhinal gyrus
nTPM: 24.6
1794 Male, age 80, right hemisphere 29.3
2521 Female, age 94, right hemisphere 27.3
1847 Female, age 91, left hemisphere 25.5
1841 Female, age 85, right hemisphere 22.8
2848 Male, age 76, right hemisphere 17.9
Subiculum
nTPM: 20.6
2729 Female, age 91, right hemisphere 29.6
2619 Male, age 74, both hemispheres 27.8
2438 Female, age 94, left hemisphere 24.8
1977 Female, age 85, both hemispheres 18.2
1901 Male, age 80, both hemispheres 12.3
2042 Male, age 76, both hemispheres 11.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.3
Samples: 197

Max nTPM: 43.0
Min nTPM: 3.1
Std nTPM: 5.8
Median nTPM: 12.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 43.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 33.7
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 29.9
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 29.4
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 27.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 26.8
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 25.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 25.2
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 24.8
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 24.8
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 24.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 27.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 27.0
FF:10153-102I9 76 years, female 32.1
FF:10169-103B7 60 years, female 21.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 35.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 32.5
Samples: 4

Max nTPM: 35.8
Min nTPM: 30.1
Sample A Female 32.3
Sample B Female 35.8
Sample C Male 30.1
Sample D Male 31.8
Entorhinal cortex
nTPM: 35.9
Samples: 4

Max nTPM: 40.5
Min nTPM: 33.1
Sample A Female 33.9
Sample B Female 35.9
Sample C Male 40.5
Sample D Male 33.1
Subiculum
nTPM: 30.6
Samples: 4

Max nTPM: 35.8
Min nTPM: 26.3
Sample A Female 35.8
Sample B Female 28.1
Sample C Male 32.3
Sample D Male 26.3
Ventral hippocampus
nTPM: 31.9
Samples: 4

Max nTPM: 42.8
Min nTPM: 24.1
Sample A Female 25.6
Sample B Female 24.1
Sample C Male 42.8
Sample D Male 34.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 61.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 53.9
Samples: 4

Max nTPM: 58.4
Min nTPM: 51.3
Sample A Male 58.4
Sample B Male 54.4
Sample C Female 51.3
Sample D Female 51.4
Hippocampal formation
nTPM: 60.9
Samples: 4

Max nTPM: 71.9
Min nTPM: 49.7
Sample A Male 49.7
Sample B Male 64.4
Sample C Female 71.9
Sample D Female 57.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.6
74821649 Antisense, RP_060321_02_B08, Mouse strain C57BL/6J (56 days, male) 14.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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