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RNF141
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:52.7 nTPM
HPA:52.7 nTPM
GTEx:76.4 nTPM
FANTOM5:246.2 Scaled Tags Per Million
Pig:50.4 nTPM
Mouse:66.5 nTPM
Allen mouse:0.3 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 52.7
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 46.9
1870 Female, age 42, unknown 57.2
2411 Female, age 72, unknown 53.3
2828 Female, age 72, unknown 49.4
1833 Male, age 53, unknown 48.8
1830 Male, age 51, unknown 47.7
2019 Male, age 18, unknown 46.8
1827 Male, age 72, unknown 44.6
2666 Male, age 74, left hemisphere 44.6
2586 Male, age 75, left hemisphere 44.4
2219 Male, age 76, both hemispheres 32.6
Dorsal raphe nucleus
nTPM: 45.5
2750 Male, age 76, both hemispheres 52.6
2016 Female, age 72, unknown 48.8
1828 Male, age 53, unknown 44.5
2047 Male, age 72, unknown 42.5
2298 Female, age 72, unknown 39.0
Inferior colliculus
nTPM: 41.6
1890 Male, age 53, unknown 44.3
2097 Female, age 72, unknown 43.3
1848 Female, age 42, unknown 41.5
2849 Male, age 72, unknown 37.2
Median raphe nucleus
nTPM: 40.3
2220 Male, age 76, midline 40.3
Pedunculopontine tegmental nucleus
nTPM: 41.9
2334 Male, age 80, both hemispheres 45.6
1921 Female, age 85, both hemispheres 43.1
2338 Male, age 61, both hemispheres 36.9
Periaquaductal grey, anterior
nTPM: 41.8
2502 Female, age 75, unknown 47.9
1947 Male, age 18, unknown 40.8
1795 Male, age 51, unknown 36.7
Periaquaductal grey, dorsal
nTPM: 41.7
1831 Male, age 72, unknown 44.3
2464 Female, age 72, unknown 43.3
1840 Male, age 53, unknown 39.9
2850 Male, age 76, both hemispheres 39.3
Periaquaductal grey, lateral
nTPM: 41.5
2053 Male, age 18, unknown 50.1
2140 Male, age 76, both hemispheres 40.2
2272 Male, age 74, both hemispheres 34.1
Pretectal area
nTPM: 42.4
1815 Male, age 53, unknown 47.9
2316 Male, age 76, right hemisphere 44.4
1816 Male, age 51, unknown 43.2
2667 Female, age 75, unknown 43.1
1817 Female, age 42, unknown 42.8
2407 Male, age 75, both hemispheres 42.4
2007 Male, age 72, unknown 42.2
2273 Male, age 74, both hemispheres 41.8
1944 Female, age 72, unknown 40.6
2825 Male, age 18, unknown 40.4
2224 Female, age 72, unknown 38.0
Red nucleus
nTPM: 52.7
1821 Female, age 72, unknown 64.2
2823 Male, age 76, right hemisphere 59.4
2503 Female, age 72, unknown 58.4
1904 Male, age 53, unknown 57.4
1865 Male, age 51, unknown 55.7
1954 Female, age 42, unknown 55.2
2769 Male, age 72, unknown 51.2
2227 Male, age 72, unknown 50.9
2785 Male, age 18, unknown 47.5
2588 Male, age 74, left hemisphere 47.2
2725 Female, age 75, unknown 43.6
2584 Male, age 75, left hemisphere 41.8
Substantia nigra
nTPM: 46.0
1851 Male, age 51, unknown 50.2
2409 Female, age 72, unknown 49.0
2241 Male, age 72, unknown 48.2
1889 Female, age 72, unknown 48.0
2699 Male, age 18, unknown 47.9
2583 Male, age 75, right hemisphere 46.5
2590 Female, age 75, unknown 45.4
2665 Male, age 74, both hemispheres 44.6
1916 Female, age 42, unknown 42.1
1941 Male, age 53, unknown 37.7
Superior colliculus
nTPM: 46.4
1913 Female, age 42, unknown 57.3
1995 Male, age 72, unknown 53.7
2587 Male, age 74, left hemisphere 51.7
2668 Female, age 75, unknown 47.2
2664 Male, age 75, both hemispheres 44.5
1839 Male, age 51, unknown 44.0
1895 Male, age 76, right hemisphere 42.6
2261 Male, age 18, unknown 41.6
1796 Male, age 53, unknown 41.4
2087 Female, age 72, unknown 40.3
Ventral tegmental area
nTPM: 46.6
2410 Female, age 72, unknown 51.7
2223 Female, age 72, unknown 48.4
2021 Male, age 53, unknown 47.9
1942 Male, age 51, unknown 45.2
1915 Female, age 42, unknown 44.4
2218 Male, age 76, both hemispheres 42.0

MIDBRAIN - GTEx RNA-seqi
Average nTPM 76.4
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 76.4
Samples: 139

Max nTPM: 156.6
Min nTPM: 28.4
Std nTPM: 24.3
Median nTPM: 70.6
GTEX-13NYB-0011-R2a-SM-5MR3C 40-49 years, male 156.6
GTEX-1LVA9-0011-R2a-SM-EZ6MJ 50-59 years, male 148.9
GTEX-ZV68-0011-R2a-SM-4YCDK 50-59 years, female 128.1
GTEX-12WSH-0011-R2a-SM-5GU68 50-59 years, male 126.6
GTEX-1GN1U-0011-R2a-SM-CL53A 50-59 years, female 121.4
GTEX-1LB8K-0011-R2a-SM-EZ6MQ 50-59 years, male 119.8
GTEX-11UD1-0011-R2b-SM-5BC6O 40-49 years, female 119.2
GTEX-11ZTS-0011-R2b-SM-5BC75 60-69 years, female 118.1
GTEX-Q2AG-0011-R2A-SM-2HMIT 40-49 years, female 117.2
GTEX-YJ89-0011-R2b-SM-4RGLT 60-69 years, male 116.7
GTEX-1A8G7-0011-R2a-SM-7IGQI 60-69 years, male 116.0
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 246.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 246.2
FF:10158-103A5 76 years, female 246.2

MIDBRAIN - Pig RNA-seqi
Average nTPM 50.4
Pig sample Sample description nTPM
Midbrain
nTPM: 50.4
Samples: 4

Max nTPM: 84.4
Min nTPM: 31.1
Sample A Female 84.4
Sample B Female 48.7
Sample C Male 37.5
Sample D Male 31.1
Periaqueductal gray
nTPM: 35.1
Samples: 3

Max nTPM: 37.6
Min nTPM: 32.8
Sample B Female 37.6
Sample C Male 32.8
Sample D Male 34.9
Substantia nigra
nTPM: 44.2
Samples: 4

Max nTPM: 50.7
Min nTPM: 38.6
Sample A Female 50.7
Sample B Female 38.6
Sample C Male 42.7
Sample D Male 44.9
Superior colliculi
nTPM: 35.6
Samples: 4

Max nTPM: 42.8
Min nTPM: 23.7
Sample A Female 42.8
Sample B Female 23.7
Sample C Male 36.9
Sample D Male 39.0

MIDBRAIN - Mouse RNA-seqi
Average nTPM 66.5
Mouse sample Sample description nTPM
Midbrain
nTPM: 66.5
Samples: 4

Max nTPM: 70.6
Min nTPM: 63.5
Sample A Male 70.6
Sample B Male 65.3
Sample C Female 63.5
Sample D Female 66.6

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 0.3
564645 Antisense, RP_040826_01_B01, Mouse strain C57BL/6J (56 days, male) 0.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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