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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:511.1 nTPM
HPA:511.1 nTPM
GTEx:454.7 nTPM
FANTOM5:626.2 Scaled Tags Per Million
Pig:308.6 nTPM
Mouse:436.6 nTPM
Allen mouse:11.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007234Antibody CAB002507
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 511.1
Sample id Sample description nTPM
Hippocampus
nTPM: 511.1
1898 Male, age 80, left hemisphere 540.6
2529 Female, age 94, left hemisphere 526.3
1855 Male, age 76, left hemisphere 520.0
2148 Female, age 91, left hemisphere 519.3
1911 Female, age 85, right hemisphere 492.2
2621 Female, age 67, right hemisphere 468.5
Dentate gyrus
nTPM: 493.5
2528 Male, age 74, both hemispheres 562.2
2530 Female, age 94, left hemisphere 534.9
2010 Male, age 76, both hemispheres 487.0
2246 Female, age 85, both hemispheres 477.7
1927 Female, age 91, both hemispheres 457.9
2531 Female, age 67, both hemispheres 441.4
Entorhinal gyrus
nTPM: 495.0
2117 Female, age 91, right hemisphere 599.2
1787 Male, age 76, left hemisphere 492.4
2764 Male, age 80, right hemisphere 481.5
1938 Female, age 85, left hemisphere 478.1
2613 Female, age 94, left hemisphere 474.5
2686 Male, age 75, right hemisphere 444.5
Hippocampus, CA1
nTPM: 481.1
2082 Female, age 91, right hemisphere 516.4
2527 Male, age 74, both hemispheres 500.8
1873 Female, age 85, both hemispheres 491.3
2749 Male, age 80, left hemisphere 453.0
2045 Male, age 76, both hemispheres 444.2
Hippocampus, CA2
nTPM: 504.8
2249 Male, age 74, both hemispheres 547.3
2113 Female, age 91, right hemisphere 520.2
1940 Female, age 85, left hemisphere 512.3
1963 Male, age 80, left hemisphere 509.6
2437 Female, age 94, left hemisphere 497.1
1892 Male, age 76, both hemispheres 442.5
Hippocampus, CA3
nTPM: 472.4
2436 Male, age 74, both hemispheres 489.2
1891 Female, age 85, both hemispheres 488.1
2620 Female, age 94, left hemisphere 483.9
2861 Female, age 67, both hemispheres 472.4
1867 Male, age 76, both hemispheres 458.9
2137 Male, age 80, left hemisphere 441.6
Parahippocampal cortex
nTPM: 464.5
2250 Female, age 67, right hemisphere 494.4
1933 Female, age 85, both hemispheres 481.7
2018 Male, age 76, both hemispheres 478.9
1990 Female, age 91, right hemisphere 478.7
2692 Male, age 74, both hemispheres 463.1
1850 Male, age 80, both hemispheres 459.2
2622 Female, age 67, right hemisphere 458.6
2245 Female, age 91, both hemispheres 454.0
2693 Female, age 94, both hemispheres 439.5
2532 Female, age 72, left hemisphere 436.9
Perirhinal gyrus
nTPM: 456.1
1794 Male, age 80, right hemisphere 480.8
1847 Female, age 91, left hemisphere 463.4
1841 Female, age 85, right hemisphere 451.1
2521 Female, age 94, right hemisphere 450.2
2848 Male, age 76, right hemisphere 435.0
Subiculum
nTPM: 495.8
2729 Female, age 91, right hemisphere 583.2
2042 Male, age 76, both hemispheres 504.0
2619 Male, age 74, both hemispheres 500.3
1901 Male, age 80, both hemispheres 482.5
1977 Female, age 85, both hemispheres 482.3
2438 Female, age 94, left hemisphere 422.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 454.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 454.7
Samples: 197

Max nTPM: 907.9
Min nTPM: 263.4
Std nTPM: 111.1
Median nTPM: 445.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 907.9
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 798.5
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 761.0
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 746.3
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 699.4
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 695.5
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 682.5
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 660.1
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 659.8
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 653.5
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 651.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 626.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 626.2
FF:10169-103B7 60 years, female 679.0
FF:10153-102I9 76 years, female 573.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 308.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 286.7
Samples: 4

Max nTPM: 371.6
Min nTPM: 218.8
Sample A Female 371.6
Sample B Female 229.5
Sample C Male 326.9
Sample D Male 218.8
Entorhinal cortex
nTPM: 259.4
Samples: 4

Max nTPM: 300.8
Min nTPM: 197.1
Sample A Female 300.8
Sample B Female 251.6
Sample C Male 288.2
Sample D Male 197.1
Subiculum
nTPM: 291.5
Samples: 4

Max nTPM: 393.6
Min nTPM: 250.3
Sample A Female 393.6
Sample B Female 255.7
Sample C Male 266.5
Sample D Male 250.3
Ventral hippocampus
nTPM: 308.6
Samples: 4

Max nTPM: 414.9
Min nTPM: 220.9
Sample A Female 326.8
Sample B Female 220.9
Sample C Male 414.9
Sample D Male 271.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 436.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 373.8
Samples: 4

Max nTPM: 405.1
Min nTPM: 333.4
Sample A Male 374.7
Sample B Male 333.4
Sample C Female 405.1
Sample D Female 382.1
Hippocampal formation
nTPM: 436.6
Samples: 4

Max nTPM: 483.5
Min nTPM: 381.2
Sample A Male 412.5
Sample B Male 381.2
Sample C Female 483.5
Sample D Female 469.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.1
68269526 Antisense, RP_041129_01_G04, Mouse strain C57BL/6J (56 days, male) 12.3
227 Antisense, RP_Baylor_102672, Mouse strain C57BL/6J (56 days, male) 9.8
226 Antisense, RP_Baylor_102672, Mouse strain C57BL/6J (56 days, male) 7.9

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.