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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:18.2 nTPM
HPA:18.2 nTPM
GTEx:23.9 nTPM
FANTOM5:29.1 Scaled Tags Per Million
Pig:14.4 nTPM
Mouse:19.3 nTPM
Allen mouse:9.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.2
Sample id Sample description nTPM
Hippocampus
nTPM: 15.7
2148 Female, age 91, left hemisphere 20.0
1855 Male, age 76, left hemisphere 16.2
2621 Female, age 67, right hemisphere 15.1
2529 Female, age 94, left hemisphere 14.7
1898 Male, age 80, left hemisphere 14.3
1911 Female, age 85, right hemisphere 14.2
Dentate gyrus
nTPM: 14.0
2530 Female, age 94, left hemisphere 15.8
2528 Male, age 74, both hemispheres 15.0
2246 Female, age 85, both hemispheres 14.4
1927 Female, age 91, both hemispheres 13.6
2531 Female, age 67, both hemispheres 13.6
2010 Male, age 76, both hemispheres 11.7
Entorhinal gyrus
nTPM: 18.2
2613 Female, age 94, left hemisphere 22.6
1787 Male, age 76, left hemisphere 19.0
1938 Female, age 85, left hemisphere 17.3
2764 Male, age 80, right hemisphere 17.1
2117 Female, age 91, right hemisphere 16.9
2686 Male, age 75, right hemisphere 16.4
Hippocampus, CA1
nTPM: 14.7
2527 Male, age 74, both hemispheres 18.7
2082 Female, age 91, right hemisphere 15.3
1873 Female, age 85, both hemispheres 14.0
2045 Male, age 76, both hemispheres 13.8
2749 Male, age 80, left hemisphere 11.6
Hippocampus, CA2
nTPM: 14.6
2437 Female, age 94, left hemisphere 18.1
1963 Male, age 80, left hemisphere 14.9
2113 Female, age 91, right hemisphere 14.7
1892 Male, age 76, both hemispheres 13.6
2249 Male, age 74, both hemispheres 13.5
1940 Female, age 85, left hemisphere 12.8
Hippocampus, CA3
nTPM: 14.3
2861 Female, age 67, both hemispheres 19.2
2620 Female, age 94, left hemisphere 17.3
1891 Female, age 85, both hemispheres 14.6
1867 Male, age 76, both hemispheres 14.3
2436 Male, age 74, both hemispheres 11.1
2137 Male, age 80, left hemisphere 9.5
Parahippocampal cortex
nTPM: 15.3
2692 Male, age 74, both hemispheres 19.3
2693 Female, age 94, both hemispheres 18.0
1990 Female, age 91, right hemisphere 16.3
2622 Female, age 67, right hemisphere 16.0
1933 Female, age 85, both hemispheres 15.5
2018 Male, age 76, both hemispheres 15.2
1850 Male, age 80, both hemispheres 14.5
2250 Female, age 67, right hemisphere 13.8
2245 Female, age 91, both hemispheres 13.7
2532 Female, age 72, left hemisphere 10.9
Perirhinal gyrus
nTPM: 15.4
2521 Female, age 94, right hemisphere 18.9
1847 Female, age 91, left hemisphere 17.5
1794 Male, age 80, right hemisphere 14.1
2848 Male, age 76, right hemisphere 14.0
1841 Female, age 85, right hemisphere 12.4
Subiculum
nTPM: 15.4
2729 Female, age 91, right hemisphere 18.0
2619 Male, age 74, both hemispheres 17.3
2438 Female, age 94, left hemisphere 16.5
1977 Female, age 85, both hemispheres 14.2
1901 Male, age 80, both hemispheres 13.8
2042 Male, age 76, both hemispheres 12.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 23.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 23.9
Samples: 197

Max nTPM: 49.8
Min nTPM: 5.5
Std nTPM: 7.1
Median nTPM: 23.4
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 49.8
GTEX-17HII-0011-R1b-SM-7MGVW 50-59 years, male 42.2
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 41.8
GTEX-16Z82-0011-R1b-SM-7EPHZ 60-69 years, male 40.4
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 37.4
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 37.0
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 37.0
GTEX-13CF2-0011-R1a-SM-5LZY1 60-69 years, male 36.9
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 36.6
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 36.3
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 35.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 29.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.1
FF:10153-102I9 76 years, female 36.2
FF:10169-103B7 60 years, female 21.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.2
Samples: 4

Max nTPM: 16.8
Min nTPM: 10.2
Sample A Female 16.2
Sample B Female 16.8
Sample C Male 13.6
Sample D Male 10.2
Entorhinal cortex
nTPM: 14.4
Samples: 4

Max nTPM: 16.3
Min nTPM: 11.8
Sample A Female 16.3
Sample B Female 11.8
Sample C Male 15.9
Sample D Male 13.6
Subiculum
nTPM: 14.0
Samples: 4

Max nTPM: 18.5
Min nTPM: 10.8
Sample A Female 18.5
Sample B Female 12.4
Sample C Male 14.2
Sample D Male 10.8
Ventral hippocampus
nTPM: 14.0
Samples: 4

Max nTPM: 19.8
Min nTPM: 9.8
Sample A Female 9.8
Sample B Female 10.5
Sample C Male 15.9
Sample D Male 19.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 19.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 19.3
Samples: 4

Max nTPM: 24.3
Min nTPM: 16.9
Sample A Male 18.8
Sample B Male 17.2
Sample C Female 16.9
Sample D Female 24.3
Hippocampal formation
nTPM: 10.1
Samples: 4

Max nTPM: 11.1
Min nTPM: 9.4
Sample A Male 9.4
Sample B Male 9.7
Sample C Female 10.1
Sample D Female 11.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.1
71654154 Antisense, RP_050927_03_D10, Mouse strain C57BL/6J (56 days, male) 9.1

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