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HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:34.7 nTPM
HPA:34.7 nTPM
GTEx:21.0 nTPM
FANTOM5:70.9 Scaled Tags Per Million
Mouse:43.7 nTPM
Allen mouse:3.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.7
Sample id Sample description nTPM
Hippocampus
nTPM: 33.5
2529 Female, age 94, left hemisphere 35.8
1898 Male, age 80, left hemisphere 35.5
2148 Female, age 91, left hemisphere 34.2
1855 Male, age 76, left hemisphere 33.3
1911 Female, age 85, right hemisphere 32.0
2621 Female, age 67, right hemisphere 30.3
Dentate gyrus
nTPM: 33.2
2010 Male, age 76, both hemispheres 35.7
2530 Female, age 94, left hemisphere 35.6
2246 Female, age 85, both hemispheres 34.6
2528 Male, age 74, both hemispheres 32.8
1927 Female, age 91, both hemispheres 31.7
2531 Female, age 67, both hemispheres 28.9
Entorhinal gyrus
nTPM: 32.9
1938 Female, age 85, left hemisphere 35.1
1787 Male, age 76, left hemisphere 34.7
2117 Female, age 91, right hemisphere 34.3
2764 Male, age 80, right hemisphere 33.0
2686 Male, age 75, right hemisphere 30.5
2613 Female, age 94, left hemisphere 30.1
Hippocampus, CA1
nTPM: 34.0
2749 Male, age 80, left hemisphere 37.6
1873 Female, age 85, both hemispheres 34.4
2527 Male, age 74, both hemispheres 33.9
2045 Male, age 76, both hemispheres 32.2
2082 Female, age 91, right hemisphere 31.9
Hippocampus, CA2
nTPM: 34.7
1892 Male, age 76, both hemispheres 40.9
1963 Male, age 80, left hemisphere 38.1
2249 Male, age 74, both hemispheres 33.5
2113 Female, age 91, right hemisphere 32.9
1940 Female, age 85, left hemisphere 31.9
2437 Female, age 94, left hemisphere 31.0
Hippocampus, CA3
nTPM: 33.7
1867 Male, age 76, both hemispheres 38.9
2137 Male, age 80, left hemisphere 36.0
1891 Female, age 85, both hemispheres 32.5
2436 Male, age 74, both hemispheres 32.2
2861 Female, age 67, both hemispheres 31.6
2620 Female, age 94, left hemisphere 30.7
Parahippocampal cortex
nTPM: 31.9
1933 Female, age 85, both hemispheres 34.3
2692 Male, age 74, both hemispheres 32.9
2532 Female, age 72, left hemisphere 32.2
1850 Male, age 80, both hemispheres 32.1
2250 Female, age 67, right hemisphere 32.1
1990 Female, age 91, right hemisphere 31.6
2245 Female, age 91, both hemispheres 31.6
2018 Male, age 76, both hemispheres 31.1
2622 Female, age 67, right hemisphere 30.9
2693 Female, age 94, both hemispheres 30.2
Perirhinal gyrus
nTPM: 32.5
1847 Female, age 91, left hemisphere 34.0
1841 Female, age 85, right hemisphere 33.8
2848 Male, age 76, right hemisphere 33.0
1794 Male, age 80, right hemisphere 31.2
2521 Female, age 94, right hemisphere 30.5
Subiculum
nTPM: 32.4
1977 Female, age 85, both hemispheres 33.6
2619 Male, age 74, both hemispheres 32.8
2042 Male, age 76, both hemispheres 32.6
1901 Male, age 80, both hemispheres 32.5
2729 Female, age 91, right hemisphere 32.0
2438 Female, age 94, left hemisphere 30.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.0
Samples: 197

Max nTPM: 34.3
Min nTPM: 10.9
Std nTPM: 3.4
Median nTPM: 20.8
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 34.3
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 33.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 30.4
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 30.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 28.5
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 28.1
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 27.9
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 27.9
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 27.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 27.1
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 26.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 70.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 70.9
FF:10153-102I9 76 years, female 81.2
FF:10169-103B7 60 years, female 60.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 43.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 40.5
Samples: 4

Max nTPM: 45.3
Min nTPM: 37.3
Sample A Male 37.3
Sample B Male 37.3
Sample C Female 41.9
Sample D Female 45.3
Hippocampal formation
nTPM: 43.7
Samples: 4

Max nTPM: 51.1
Min nTPM: 40.7
Sample A Male 41.4
Sample B Male 40.7
Sample C Female 51.1
Sample D Female 41.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.8
73732149 Antisense, RP_051121_04_A07, Mouse strain C57BL/6J (56 days, male) 7.1
70474929 Antisense, RP_050623_01_D07, Mouse strain C57BL/6J (56 days, male) 4.6
68151390 Antisense, RP_041116_01_B01, Mouse strain C57BL/6J (56 days, male) 2.8
73930854 Antisense, RP_051214_04_D07, Mouse strain C57BL/6J (56 days, male) 0.7

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The Human Protein Atlas

The Human Protein Atlas project is funded
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