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RAB5B
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:93.1 nTPM
HPA:93.1 nTPM
GTEx:70.5 nTPM
FANTOM5:151.5 Scaled Tags Per Million
Mouse:106.6 nTPM
Allen mouse:14.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB010224
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 93.1
Sample id Sample description nTPM
Hippocampus
nTPM: 86.6
1898 Male, age 80, left hemisphere 90.5
2529 Female, age 94, left hemisphere 87.5
1911 Female, age 85, right hemisphere 87.4
1855 Male, age 76, left hemisphere 85.6
2148 Female, age 91, left hemisphere 84.7
2621 Female, age 67, right hemisphere 83.7
Dentate gyrus
nTPM: 88.3
2530 Female, age 94, left hemisphere 99.0
2010 Male, age 76, both hemispheres 88.4
2246 Female, age 85, both hemispheres 88.1
2528 Male, age 74, both hemispheres 87.6
2531 Female, age 67, both hemispheres 83.6
1927 Female, age 91, both hemispheres 82.9
Entorhinal gyrus
nTPM: 89.5
2117 Female, age 91, right hemisphere 96.1
1938 Female, age 85, left hemisphere 92.2
2764 Male, age 80, right hemisphere 92.0
1787 Male, age 76, left hemisphere 90.1
2613 Female, age 94, left hemisphere 85.0
2686 Male, age 75, right hemisphere 81.8
Hippocampus, CA1
nTPM: 87.6
2749 Male, age 80, left hemisphere 101.8
2527 Male, age 74, both hemispheres 90.6
2082 Female, age 91, right hemisphere 85.2
1873 Female, age 85, both hemispheres 84.1
2045 Male, age 76, both hemispheres 76.4
Hippocampus, CA2
nTPM: 91.4
2249 Male, age 74, both hemispheres 96.3
1963 Male, age 80, left hemisphere 95.1
2437 Female, age 94, left hemisphere 93.7
1892 Male, age 76, both hemispheres 88.8
2113 Female, age 91, right hemisphere 88.2
1940 Female, age 85, left hemisphere 86.5
Hippocampus, CA3
nTPM: 85.7
2137 Male, age 80, left hemisphere 92.7
1891 Female, age 85, both hemispheres 88.4
1867 Male, age 76, both hemispheres 85.5
2436 Male, age 74, both hemispheres 83.8
2620 Female, age 94, left hemisphere 83.0
2861 Female, age 67, both hemispheres 80.8
Parahippocampal cortex
nTPM: 87.0
1850 Male, age 80, both hemispheres 95.2
2532 Female, age 72, left hemisphere 92.0
1933 Female, age 85, both hemispheres 91.7
1990 Female, age 91, right hemisphere 89.9
2250 Female, age 67, right hemisphere 88.4
2245 Female, age 91, both hemispheres 85.7
2018 Male, age 76, both hemispheres 83.6
2693 Female, age 94, both hemispheres 83.0
2692 Male, age 74, both hemispheres 81.5
2622 Female, age 67, right hemisphere 78.8
Perirhinal gyrus
nTPM: 93.1
1794 Male, age 80, right hemisphere 99.9
2521 Female, age 94, right hemisphere 92.5
1841 Female, age 85, right hemisphere 92.3
1847 Female, age 91, left hemisphere 92.3
2848 Male, age 76, right hemisphere 88.8
Subiculum
nTPM: 89.6
1977 Female, age 85, both hemispheres 96.9
2438 Female, age 94, left hemisphere 94.4
1901 Male, age 80, both hemispheres 90.3
2619 Male, age 74, both hemispheres 89.4
2729 Female, age 91, right hemisphere 85.9
2042 Male, age 76, both hemispheres 80.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 70.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 70.5
Samples: 197

Max nTPM: 111.0
Min nTPM: 19.4
Std nTPM: 17.6
Median nTPM: 69.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 111.0
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 110.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 110.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 109.8
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 106.4
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 103.1
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 101.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 101.3
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 100.8
GTEX-1H1CY-0011-R1a-SM-CKZOZ 60-69 years, female 100.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 98.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 151.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 151.5
FF:10153-102I9 76 years, female 174.4
FF:10169-103B7 60 years, female 128.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 106.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 102.9
Samples: 4

Max nTPM: 108.5
Min nTPM: 97.9
Sample A Male 97.9
Sample B Male 98.6
Sample C Female 106.5
Sample D Female 108.5
Hippocampal formation
nTPM: 106.7
Samples: 4

Max nTPM: 114.5
Min nTPM: 101.1
Sample A Male 114.5
Sample B Male 101.1
Sample C Female 108.5
Sample D Female 102.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.1
100144441 Antisense, RP_110407_02_B12, Mouse strain C57BL/6J (56 days, male) 14.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.