Brain tissue expression of CPSF6 in retina

RETINA - Expression summary

Protein expressionⁱ

No data

RNA expressionⁱ

Consensus:	43.5	nTPM
GTEx:	43.5	nTPM
FANTOM5:	89.4	Scaled Tags Per Million

Pig:	55.3	nTPM
Mouse:	35.0	nTPM

RETINA - GTEx RNA-seqⁱ

Average nTPM	43.5

GTEx sample id

Sample description

nTPM

Retina
Average nTPM: 43.5

Samples: 105

Max nTPM: 93.0
Min nTPM: 27.6
Std nTPM: 9.4
Median nTPM: 0.0

41_1	94 years, female	93.0
142_1	61 years, female	65.6
396_1	62 years, male	64.1
316_1	62 years, male	61.9
139_1	64 years, female	61.0
81_1	67 years, male	59.5
149_1	88 years, male	57.9
352_1	62 years, male	57.1
89_1	63 years, male	56.5
145_1	84 years, male	55.8
32_1	67 years, male	53.8
321_1	62 years, female	53.5
162_1	79 years, female	53.1
404_1	82 years, female	52.8
348_1	84 years, male	52.1
119_1	70 years, female	52.0
43_1	64 years, female	51.8
286_1	68 years, female	51.6
413_1	59 years, female	50.4
317_1	60 years, male	50.1
217_1	76 years, male	49.4
447_1	81 years, male	49.4
314_1	67 years, male	49.1
246_1	77 years, male	48.9
349_1	83 years, male	48.8
517_1	88 years, male	48.6
491_1	89 years, female	48.5
137_1	83 years, male	48.4
452_1	88 years, female	48.1
406_1	79 years, male	47.9
414_1	84 years, female	47.5
503_1	68 years, male	47.1
322_1	76 years, male	46.9
307_1	66 years, female	46.5
518_1	75 years, female	46.5
264_1	73 years, female	45.9
501_1	88 years, male	45.8
266_1	85 years, male	45.6
18_1	88 years, male	45.0
318_1	68 years, male	45.0
335_1	73 years, female	45.0
189_1	76 years, male	44.9
229_1	69 years, female	44.8
153_1	70 years, female	44.6
466_1	57 years, female	43.9
468_1	89 years, male	43.6
99_1	64 years, male	43.4
415_1	77 years, female	43.4
126_1	63 years, male	43.2
375_1	74 years, female	43.0
265_1	87 years, male	42.9
490_1	67 years, female	42.8
109_1	81 years, female	42.4
117_1	61 years, male	42.4
324_1	76 years, male	42.3
35_1	74 years, female	42.0
292_1	71 years, male	41.8
495_1	57 years, female	41.5
355_1	70 years, female	41.0
499_1	55 years, female	40.3
288_1	66 years, female	39.9
405_1	91 years, male	39.9
291_1	76 years, male	39.8
42_1	85 years, male	39.4
506_1	65 years, male	39.4
9_1	66 years, female	39.2
254_1	77 years, female	39.2
120_1	70 years, female	39.1
115_1	83 years, male	39.0
311_1	78 years, male	39.0
526_1	61 years, male	38.8
315_1	62 years, female	38.7
251_1	78 years, male	38.4
4_1	88 years, female	38.3
173_1	67 years, male	38.1
6_1	73 years, female	38.0
177_1	74 years, male	38.0
17_1	71 years, male	37.9
237_1	82 years, male	37.6
350_1	84 years, female	37.5
354_1	81 years, female	37.0
394_1	75 years, female	36.7
295_1	61 years, female	36.4
425_1	59 years, female	35.9
308_1	70 years, female	35.7
351_1	91 years, male	35.5
172_1	72 years, female	35.3
163_1	78 years, male	35.2
389_1	86 years, female	35.2
353_1	82 years, female	35.0
376_1	75 years, female	34.5
218_1	71 years, female	34.2
356_1	87 years, female	34.0
347_1	72 years, male	33.4
243_1	75 years, male	33.3
320_1	89 years, female	33.3
386_1	76 years, male	32.8
293_1	68 years, female	32.6
379_1	60 years, male	32.6
2_1	77 years, female	31.3
480_1	63 years, male	30.6
377_1	82 years, female	29.5
384_1	83 years, male	28.9
319_1	81 years, male	28.2
313_1	79 years, female	27.6
Show allShow less

RETINA - FANTOM5 CAGEⁱ

Max Scaled Tags Per Million	89.4

FANTOM5 sample id

Sample description

Scaled Tags Per Million

Retina
Scaled Tags Per Million: 89.4

FF:10030-101E3

24-65 years, mixed

89.4

RETINA - Pig RNA-seqⁱ

Average nTPM	55.3

Pig sample

Sample description

nTPM

Retina
nTPM: 55.3

Samples: 4

Max nTPM: 61.8
Min nTPM: 47.2

Sample A	Female	56.5
Sample B	Female	47.2
Sample C	Male	61.8
Sample D	Male	55.7

RETINA - Mouse RNA-seqⁱ

Average nTPM	35.0

Mouse sample

Sample description

nTPM

Retina
nTPM: 35.0

Samples: 4

Max nTPM: 38.0
Min nTPM: 31.1

Sample A	Male	31.1
Sample B	Male	37.7
Sample C	Female	33.0
Sample D	Female	38.0