ABOUTMENU
HELP
NEWS
CMAS
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:51.2 nTPM
HPA:51.2 nTPM
GTEx:54.9 nTPM
FANTOM5:49.2 Scaled Tags Per Million
Pig:31.2 nTPM
Mouse:91.2 nTPM
Allen mouse:21.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA039905
Glial cells High
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 51.2
Sample id Sample description nTPM
Hippocampus
nTPM: 40.7
1898 Male, age 80, left hemisphere 53.1
2529 Female, age 94, left hemisphere 40.2
1855 Male, age 76, left hemisphere 39.6
2621 Female, age 67, right hemisphere 39.3
2148 Female, age 91, left hemisphere 36.4
1911 Female, age 85, right hemisphere 35.4
Dentate gyrus
nTPM: 41.2
2010 Male, age 76, both hemispheres 47.0
1927 Female, age 91, both hemispheres 45.8
2530 Female, age 94, left hemisphere 42.9
2246 Female, age 85, both hemispheres 41.9
2531 Female, age 67, both hemispheres 35.9
2528 Male, age 74, both hemispheres 33.8
Entorhinal gyrus
nTPM: 42.6
2764 Male, age 80, right hemisphere 47.5
1938 Female, age 85, left hemisphere 45.4
1787 Male, age 76, left hemisphere 45.2
2613 Female, age 94, left hemisphere 42.3
2686 Male, age 75, right hemisphere 38.9
2117 Female, age 91, right hemisphere 36.3
Hippocampus, CA1
nTPM: 45.3
2749 Male, age 80, left hemisphere 64.0
1873 Female, age 85, both hemispheres 46.7
2527 Male, age 74, both hemispheres 39.3
2045 Male, age 76, both hemispheres 38.3
2082 Female, age 91, right hemisphere 38.3
Hippocampus, CA2
nTPM: 44.1
1892 Male, age 76, both hemispheres 53.0
1963 Male, age 80, left hemisphere 50.0
1940 Female, age 85, left hemisphere 44.7
2249 Male, age 74, both hemispheres 40.5
2437 Female, age 94, left hemisphere 38.9
2113 Female, age 91, right hemisphere 37.8
Hippocampus, CA3
nTPM: 42.1
2137 Male, age 80, left hemisphere 56.2
1867 Male, age 76, both hemispheres 46.7
2436 Male, age 74, both hemispheres 40.8
1891 Female, age 85, both hemispheres 39.3
2620 Female, age 94, left hemisphere 36.6
2861 Female, age 67, both hemispheres 33.1
Parahippocampal cortex
nTPM: 42.7
1850 Male, age 80, both hemispheres 54.9
1933 Female, age 85, both hemispheres 46.5
1990 Female, age 91, right hemisphere 46.0
2018 Male, age 76, both hemispheres 43.4
2245 Female, age 91, both hemispheres 43.4
2250 Female, age 67, right hemisphere 41.2
2532 Female, age 72, left hemisphere 41.0
2693 Female, age 94, both hemispheres 38.7
2692 Male, age 74, both hemispheres 37.6
2622 Female, age 67, right hemisphere 34.1
Perirhinal gyrus
nTPM: 51.2
1794 Male, age 80, right hemisphere 58.3
1847 Female, age 91, left hemisphere 57.0
2521 Female, age 94, right hemisphere 49.0
1841 Female, age 85, right hemisphere 48.2
2848 Male, age 76, right hemisphere 43.5
Subiculum
nTPM: 39.1
1901 Male, age 80, both hemispheres 47.6
1977 Female, age 85, both hemispheres 45.5
2042 Male, age 76, both hemispheres 39.5
2438 Female, age 94, left hemisphere 34.6
2619 Male, age 74, both hemispheres 34.6
2729 Female, age 91, right hemisphere 32.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 54.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 54.9
Samples: 197

Max nTPM: 142.2
Min nTPM: 20.4
Std nTPM: 24.4
Median nTPM: 47.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 142.2
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 120.0
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 118.4
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 116.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 115.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 110.5
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 108.7
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 108.6
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 106.6
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 103.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 102.8
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 49.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 49.2
FF:10169-103B7 60 years, female 55.4
FF:10153-102I9 76 years, female 43.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 31.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 30.4
Samples: 4

Max nTPM: 39.0
Min nTPM: 22.1
Sample A Female 39.0
Sample B Female 29.8
Sample C Male 30.6
Sample D Male 22.1
Entorhinal cortex
nTPM: 31.2
Samples: 4

Max nTPM: 33.4
Min nTPM: 27.3
Sample A Female 32.0
Sample B Female 33.4
Sample C Male 32.0
Sample D Male 27.3
Subiculum
nTPM: 31.2
Samples: 4

Max nTPM: 39.1
Min nTPM: 28.0
Sample A Female 39.1
Sample B Female 28.0
Sample C Male 28.5
Sample D Male 29.3
Ventral hippocampus
nTPM: 26.9
Samples: 4

Max nTPM: 29.7
Min nTPM: 19.8
Sample A Female 29.7
Sample B Female 19.8
Sample C Male 28.6
Sample D Male 29.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 91.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 91.2
Samples: 4

Max nTPM: 103.7
Min nTPM: 81.2
Sample A Male 81.2
Sample B Male 90.0
Sample C Female 89.9
Sample D Female 103.7
Hippocampal formation
nTPM: 81.3
Samples: 4

Max nTPM: 92.6
Min nTPM: 76.8
Sample A Male 92.6
Sample B Male 78.6
Sample C Female 76.8
Sample D Female 77.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 21.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 21.3
67767470 Antisense, RP_040916_02_B10, Mouse strain C57BL/6J (56 days, male) 21.3

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.