Brain tissue expression of PHC1 in retina

RETINA - Expression summary

Protein expressionⁱ

No data

RNA expressionⁱ

Consensus:	40.0	nTPM
GTEx:	40.0	nTPM
FANTOM5:	23.9	Scaled Tags Per Million

Pig:	9.8	nTPM
Mouse:	17.7	nTPM

RETINA - GTEx RNA-seqⁱ

Average nTPM	40.0

GTEx sample id

Sample description

nTPM

Retina
Average nTPM: 40.0

Samples: 105

Max nTPM: 56.7
Min nTPM: 27.9
Std nTPM: 5.7
Median nTPM: 0.0

142_1	61 years, female	56.7
349_1	83 years, male	54.6
394_1	75 years, female	54.2
4_1	88 years, female	52.6
379_1	60 years, male	52.6
503_1	68 years, male	51.8
316_1	62 years, male	48.3
126_1	63 years, male	48.2
266_1	85 years, male	47.6
218_1	71 years, female	46.2
319_1	81 years, male	45.8
506_1	65 years, male	45.8
389_1	86 years, female	45.6
163_1	78 years, male	45.5
237_1	82 years, male	45.3
321_1	62 years, female	45.3
376_1	75 years, female	45.3
354_1	81 years, female	45.2
404_1	82 years, female	45.2
356_1	87 years, female	45.1
335_1	73 years, female	44.9
109_1	81 years, female	44.7
447_1	81 years, male	44.6
137_1	83 years, male	44.5
406_1	79 years, male	44.4
264_1	73 years, female	44.1
318_1	68 years, male	43.8
162_1	79 years, female	43.7
153_1	70 years, female	43.1
99_1	64 years, male	42.9
375_1	74 years, female	42.7
322_1	76 years, male	42.6
348_1	84 years, male	42.6
115_1	83 years, male	42.5
286_1	68 years, female	42.4
119_1	70 years, female	41.8
243_1	75 years, male	41.8
452_1	88 years, female	41.8
352_1	62 years, male	41.7
173_1	67 years, male	41.2
120_1	70 years, female	41.1
139_1	64 years, female	41.0
317_1	60 years, male	41.0
499_1	55 years, female	41.0
350_1	84 years, female	40.7
314_1	67 years, male	40.6
351_1	91 years, male	40.4
396_1	62 years, male	40.4
172_1	72 years, female	40.3
229_1	69 years, female	40.2
324_1	76 years, male	40.2
32_1	67 years, male	40.0
265_1	87 years, male	39.9
355_1	70 years, female	39.9
313_1	79 years, female	39.7
42_1	85 years, male	39.5
6_1	73 years, female	39.2
377_1	82 years, female	39.1
292_1	71 years, male	39.0
117_1	61 years, male	38.9
347_1	72 years, male	38.9
217_1	76 years, male	38.7
384_1	83 years, male	38.5
517_1	88 years, male	38.4
468_1	89 years, male	38.3
320_1	89 years, female	38.1
35_1	74 years, female	37.4
288_1	66 years, female	37.4
501_1	88 years, male	37.4
518_1	75 years, female	37.1
311_1	78 years, male	36.9
291_1	76 years, male	36.7
386_1	76 years, male	36.7
81_1	67 years, male	36.4
89_1	63 years, male	36.3
145_1	84 years, male	36.0
295_1	61 years, female	35.9
491_1	89 years, female	35.9
405_1	91 years, male	35.8
414_1	84 years, female	35.5
246_1	77 years, male	35.3
315_1	62 years, female	35.3
526_1	61 years, male	35.2
177_1	74 years, male	35.0
308_1	70 years, female	34.9
9_1	66 years, female	34.8
413_1	59 years, female	34.8
17_1	71 years, male	34.5
2_1	77 years, female	34.4
189_1	76 years, male	33.9
353_1	82 years, female	33.9
415_1	77 years, female	33.9
480_1	63 years, male	33.8
43_1	64 years, female	33.5
466_1	57 years, female	33.3
490_1	67 years, female	32.9
18_1	88 years, male	32.5
495_1	57 years, female	31.9
293_1	68 years, female	31.8
425_1	59 years, female	31.6
307_1	66 years, female	31.5
41_1	94 years, female	30.8
254_1	77 years, female	29.2
251_1	78 years, male	28.2
149_1	88 years, male	27.9
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RETINA - FANTOM5 CAGEⁱ

Max Scaled Tags Per Million	23.9

FANTOM5 sample id

Sample description

Scaled Tags Per Million

Retina
Scaled Tags Per Million: 23.9

FF:10030-101E3

24-65 years, mixed

23.9

RETINA - Pig RNA-seqⁱ

Average nTPM	9.8

Pig sample

Sample description

nTPM

Retina
nTPM: 9.8

Samples: 4

Max nTPM: 11.0
Min nTPM: 8.7

Sample A	Female	9.6
Sample B	Female	8.7
Sample C	Male	11.0
Sample D	Male	9.8

RETINA - Mouse RNA-seqⁱ

Average nTPM	17.7

Mouse sample

Sample description

nTPM

Retina
nTPM: 17.8

Samples: 4

Max nTPM: 22.8
Min nTPM: 14.6

Sample A	Male	14.6
Sample B	Male	22.8
Sample C	Female	17.2
Sample D	Female	16.4