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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:60.8 nTPM
HPA:60.8 nTPM
GTEx:141.5 nTPM
FANTOM5:35.7 Scaled Tags Per Million
Pig:5.2 nTPM
Mouse:33.6 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035677
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 60.8
Sample id Sample description nTPM
Hippocampus
nTPM: 59.7
1898 Male, age 80, left hemisphere 65.0
1855 Male, age 76, left hemisphere 60.9
2621 Female, age 67, right hemisphere 60.4
2529 Female, age 94, left hemisphere 58.8
2148 Female, age 91, left hemisphere 57.0
1911 Female, age 85, right hemisphere 55.9
Dentate gyrus
nTPM: 59.5
2530 Female, age 94, left hemisphere 69.1
2010 Male, age 76, both hemispheres 63.3
1927 Female, age 91, both hemispheres 59.6
2246 Female, age 85, both hemispheres 56.3
2528 Male, age 74, both hemispheres 55.8
2531 Female, age 67, both hemispheres 52.9
Entorhinal gyrus
nTPM: 54.8
1938 Female, age 85, left hemisphere 57.7
1787 Male, age 76, left hemisphere 57.1
2686 Male, age 75, right hemisphere 54.1
2117 Female, age 91, right hemisphere 54.0
2613 Female, age 94, left hemisphere 53.5
2764 Male, age 80, right hemisphere 52.7
Hippocampus, CA1
nTPM: 58.7
1873 Female, age 85, both hemispheres 63.9
2749 Male, age 80, left hemisphere 60.0
2045 Male, age 76, both hemispheres 57.7
2527 Male, age 74, both hemispheres 56.3
2082 Female, age 91, right hemisphere 55.5
Hippocampus, CA2
nTPM: 60.8
1963 Male, age 80, left hemisphere 74.4
1892 Male, age 76, both hemispheres 61.7
2249 Male, age 74, both hemispheres 61.2
2437 Female, age 94, left hemisphere 60.2
2113 Female, age 91, right hemisphere 53.7
1940 Female, age 85, left hemisphere 53.6
Hippocampus, CA3
nTPM: 56.5
2436 Male, age 74, both hemispheres 63.5
1867 Male, age 76, both hemispheres 58.5
1891 Female, age 85, both hemispheres 56.6
2861 Female, age 67, both hemispheres 54.1
2137 Male, age 80, left hemisphere 53.8
2620 Female, age 94, left hemisphere 52.5
Parahippocampal cortex
nTPM: 55.7
1850 Male, age 80, both hemispheres 59.2
2692 Male, age 74, both hemispheres 58.3
1990 Female, age 91, right hemisphere 57.0
2250 Female, age 67, right hemisphere 56.9
2245 Female, age 91, both hemispheres 56.7
2018 Male, age 76, both hemispheres 56.3
2532 Female, age 72, left hemisphere 54.6
1933 Female, age 85, both hemispheres 54.5
2622 Female, age 67, right hemisphere 52.6
2693 Female, age 94, both hemispheres 50.4
Perirhinal gyrus
nTPM: 56.6
1847 Female, age 91, left hemisphere 61.3
1794 Male, age 80, right hemisphere 57.9
1841 Female, age 85, right hemisphere 56.5
2521 Female, age 94, right hemisphere 54.7
2848 Male, age 76, right hemisphere 52.6
Subiculum
nTPM: 55.0
2619 Male, age 74, both hemispheres 57.9
1977 Female, age 85, both hemispheres 56.2
2729 Female, age 91, right hemisphere 55.4
2042 Male, age 76, both hemispheres 54.5
1901 Male, age 80, both hemispheres 54.1
2438 Female, age 94, left hemisphere 52.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 141.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 141.5
Samples: 197

Max nTPM: 388.4
Min nTPM: 47.8
Std nTPM: 43.5
Median nTPM: 136.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 388.4
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 274.9
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 255.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 242.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 234.8
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 234.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 232.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 232.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 231.0
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 229.9
GTEX-1E1VI-0011-R1a-SM-ARZMM 50-59 years, male 228.9
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 35.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.7
FF:10169-103B7 60 years, female 40.8
FF:10153-102I9 76 years, female 30.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 5.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 5.0
Samples: 4

Max nTPM: 5.4
Min nTPM: 4.3
Sample A Female 5.2
Sample B Female 5.0
Sample C Male 4.3
Sample D Male 5.4
Entorhinal cortex
nTPM: 4.6
Samples: 4

Max nTPM: 5.2
Min nTPM: 4.1
Sample A Female 4.2
Sample B Female 4.8
Sample C Male 5.2
Sample D Male 4.1
Subiculum
nTPM: 4.2
Samples: 4

Max nTPM: 4.3
Min nTPM: 4.1
Sample A Female 4.2
Sample B Female 4.1
Sample C Male 4.1
Sample D Male 4.3
Ventral hippocampus
nTPM: 5.2
Samples: 4

Max nTPM: 6.6
Min nTPM: 3.9
Sample A Female 6.6
Sample B Female 4.9
Sample C Male 5.5
Sample D Male 3.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 33.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.2
Samples: 4

Max nTPM: 29.8
Min nTPM: 25.8
Sample A Male 27.4
Sample B Male 25.8
Sample C Female 29.6
Sample D Female 29.8
Hippocampal formation
nTPM: 33.6
Samples: 4

Max nTPM: 37.8
Min nTPM: 29.6
Sample A Male 37.8
Sample B Male 34.0
Sample C Female 33.0
Sample D Female 29.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
71991840 Antisense, RP_051012_03_F01, Mouse strain C57BL/6J (56 days, male) 0.0

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