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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:35.9 nTPM
HPA:35.9 nTPM
GTEx:36.4 nTPM
FANTOM5:38.9 Scaled Tags Per Million
Pig:18.2 nTPM
Mouse:9.8 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB017635
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 35.9
Sample id Sample description nTPM
Hippocampus
nTPM: 35.2
2148 Female, age 91, left hemisphere 41.2
2621 Female, age 67, right hemisphere 40.6
1898 Male, age 80, left hemisphere 33.8
1855 Male, age 76, left hemisphere 33.5
1911 Female, age 85, right hemisphere 31.4
2529 Female, age 94, left hemisphere 30.9
Dentate gyrus
nTPM: 35.9
2530 Female, age 94, left hemisphere 43.2
1927 Female, age 91, both hemispheres 38.7
2531 Female, age 67, both hemispheres 37.5
2010 Male, age 76, both hemispheres 32.9
2246 Female, age 85, both hemispheres 32.0
2528 Male, age 74, both hemispheres 31.1
Entorhinal gyrus
nTPM: 26.9
2613 Female, age 94, left hemisphere 30.9
2686 Male, age 75, right hemisphere 29.2
1938 Female, age 85, left hemisphere 26.6
2764 Male, age 80, right hemisphere 25.6
2117 Female, age 91, right hemisphere 24.7
1787 Male, age 76, left hemisphere 24.1
Hippocampus, CA1
nTPM: 34.4
2749 Male, age 80, left hemisphere 40.9
1873 Female, age 85, both hemispheres 40.8
2527 Male, age 74, both hemispheres 33.9
2045 Male, age 76, both hemispheres 29.3
2082 Female, age 91, right hemisphere 26.9
Hippocampus, CA2
nTPM: 34.9
1963 Male, age 80, left hemisphere 62.4
2437 Female, age 94, left hemisphere 33.2
1892 Male, age 76, both hemispheres 32.7
2113 Female, age 91, right hemisphere 28.8
2249 Male, age 74, both hemispheres 27.0
1940 Female, age 85, left hemisphere 25.6
Hippocampus, CA3
nTPM: 33.9
2861 Female, age 67, both hemispheres 47.2
2620 Female, age 94, left hemisphere 42.9
2137 Male, age 80, left hemisphere 32.0
1891 Female, age 85, both hemispheres 28.4
1867 Male, age 76, both hemispheres 26.8
2436 Male, age 74, both hemispheres 26.0
Parahippocampal cortex
nTPM: 27.0
2622 Female, age 67, right hemisphere 32.4
2245 Female, age 91, both hemispheres 30.9
2692 Male, age 74, both hemispheres 28.8
2532 Female, age 72, left hemisphere 27.9
2018 Male, age 76, both hemispheres 26.2
1933 Female, age 85, both hemispheres 25.9
2693 Female, age 94, both hemispheres 25.2
1990 Female, age 91, right hemisphere 25.1
2250 Female, age 67, right hemisphere 24.8
1850 Male, age 80, both hemispheres 23.2
Perirhinal gyrus
nTPM: 24.1
1841 Female, age 85, right hemisphere 25.2
1847 Female, age 91, left hemisphere 25.1
2521 Female, age 94, right hemisphere 24.4
1794 Male, age 80, right hemisphere 24.3
2848 Male, age 76, right hemisphere 21.7
Subiculum
nTPM: 27.3
2042 Male, age 76, both hemispheres 29.2
2729 Female, age 91, right hemisphere 28.8
2619 Male, age 74, both hemispheres 28.1
2438 Female, age 94, left hemisphere 26.8
1901 Male, age 80, both hemispheres 26.1
1977 Female, age 85, both hemispheres 24.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 36.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.4
Samples: 197

Max nTPM: 83.6
Min nTPM: 16.4
Std nTPM: 12.6
Median nTPM: 33.5
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 83.6
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 77.9
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 75.2
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 73.9
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 72.3
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 70.8
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 69.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 64.7
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 64.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 63.5
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 63.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 38.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 38.9
FF:10169-103B7 60 years, female 40.8
FF:10153-102I9 76 years, female 37.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.1
Samples: 4

Max nTPM: 16.6
Min nTPM: 11.1
Sample A Female 16.6
Sample B Female 13.9
Sample C Male 14.6
Sample D Male 11.1
Entorhinal cortex
nTPM: 18.2
Samples: 4

Max nTPM: 19.7
Min nTPM: 16.2
Sample A Female 19.7
Sample B Female 16.2
Sample C Male 19.5
Sample D Male 17.4
Subiculum
nTPM: 14.8
Samples: 4

Max nTPM: 20.3
Min nTPM: 12.3
Sample A Female 20.3
Sample B Female 12.3
Sample C Male 14.3
Sample D Male 12.3
Ventral hippocampus
nTPM: 15.0
Samples: 4

Max nTPM: 18.9
Min nTPM: 11.5
Sample A Female 14.1
Sample B Female 11.5
Sample C Male 18.9
Sample D Male 15.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 9.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 9.8
Samples: 4

Max nTPM: 10.5
Min nTPM: 8.8
Sample A Male 10.5
Sample B Male 10.2
Sample C Female 9.7
Sample D Female 8.8
Hippocampal formation
nTPM: 7.5
Samples: 4

Max nTPM: 8.1
Min nTPM: 6.6
Sample A Male 7.4
Sample B Male 8.1
Sample C Female 6.6
Sample D Female 7.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
77924442 Antisense, RP_070219_02_A03, Mouse strain C57BL/6J (56 days, male) 0.4

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