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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:12.1 nTPM
HPA:12.1 nTPM
GTEx:10.4 nTPM
FANTOM5:51.9 Scaled Tags Per Million
Pig:20.8 nTPM
Mouse:15.2 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042313
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.1
Sample id Sample description nTPM
Hippocampus
nTPM: 10.1
1898 Male, age 80, left hemisphere 10.8
2621 Female, age 67, right hemisphere 10.7
1911 Female, age 85, right hemisphere 10.5
2529 Female, age 94, left hemisphere 10.5
1855 Male, age 76, left hemisphere 9.3
2148 Female, age 91, left hemisphere 8.8
Dentate gyrus
nTPM: 9.8
2010 Male, age 76, both hemispheres 13.1
1927 Female, age 91, both hemispheres 11.1
2530 Female, age 94, left hemisphere 10.5
2528 Male, age 74, both hemispheres 8.3
2531 Female, age 67, both hemispheres 8.2
2246 Female, age 85, both hemispheres 7.8
Entorhinal gyrus
nTPM: 10.3
2613 Female, age 94, left hemisphere 10.8
2764 Male, age 80, right hemisphere 10.6
2117 Female, age 91, right hemisphere 10.5
1938 Female, age 85, left hemisphere 10.0
2686 Male, age 75, right hemisphere 9.9
1787 Male, age 76, left hemisphere 9.8
Hippocampus, CA1
nTPM: 12.1
2749 Male, age 80, left hemisphere 20.1
2045 Male, age 76, both hemispheres 14.1
1873 Female, age 85, both hemispheres 9.5
2527 Male, age 74, both hemispheres 9.0
2082 Female, age 91, right hemisphere 7.6
Hippocampus, CA2
nTPM: 10.6
1892 Male, age 76, both hemispheres 15.9
1963 Male, age 80, left hemisphere 12.7
2437 Female, age 94, left hemisphere 9.6
1940 Female, age 85, left hemisphere 8.5
2113 Female, age 91, right hemisphere 8.4
2249 Male, age 74, both hemispheres 8.4
Hippocampus, CA3
nTPM: 12.1
1867 Male, age 76, both hemispheres 19.3
2137 Male, age 80, left hemisphere 18.9
1891 Female, age 85, both hemispheres 9.9
2861 Female, age 67, both hemispheres 9.7
2436 Male, age 74, both hemispheres 7.4
2620 Female, age 94, left hemisphere 7.2
Parahippocampal cortex
nTPM: 9.7
2245 Female, age 91, both hemispheres 10.7
1850 Male, age 80, both hemispheres 10.4
1990 Female, age 91, right hemisphere 10.3
2532 Female, age 72, left hemisphere 10.2
2018 Male, age 76, both hemispheres 10.1
2250 Female, age 67, right hemisphere 9.3
2693 Female, age 94, both hemispheres 9.3
1933 Female, age 85, both hemispheres 9.2
2622 Female, age 67, right hemisphere 8.9
2692 Male, age 74, both hemispheres 8.8
Perirhinal gyrus
nTPM: 9.8
2848 Male, age 76, right hemisphere 11.0
1847 Female, age 91, left hemisphere 10.2
1841 Female, age 85, right hemisphere 9.9
1794 Male, age 80, right hemisphere 8.9
2521 Female, age 94, right hemisphere 8.8
Subiculum
nTPM: 10.3
2042 Male, age 76, both hemispheres 13.0
1901 Male, age 80, both hemispheres 12.4
2438 Female, age 94, left hemisphere 9.3
1977 Female, age 85, both hemispheres 9.2
2619 Male, age 74, both hemispheres 8.9
2729 Female, age 91, right hemisphere 8.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.4
Samples: 197

Max nTPM: 25.0
Min nTPM: 5.9
Std nTPM: 2.4
Median nTPM: 9.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 25.0
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 23.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 17.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 16.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 16.2
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 15.5
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 15.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 15.2
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 15.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 14.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 14.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 51.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 51.9
FF:10153-102I9 76 years, female 67.3
FF:10169-103B7 60 years, female 36.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 20.5
Samples: 4

Max nTPM: 25.5
Min nTPM: 16.0
Sample A Female 25.5
Sample B Female 19.7
Sample C Male 20.6
Sample D Male 16.0
Entorhinal cortex
nTPM: 17.0
Samples: 4

Max nTPM: 19.2
Min nTPM: 15.6
Sample A Female 15.6
Sample B Female 17.4
Sample C Male 19.2
Sample D Male 15.6
Subiculum
nTPM: 20.8
Samples: 4

Max nTPM: 24.7
Min nTPM: 18.6
Sample A Female 24.7
Sample B Female 19.8
Sample C Male 20.1
Sample D Male 18.6
Ventral hippocampus
nTPM: 20.2
Samples: 4

Max nTPM: 23.6
Min nTPM: 18.6
Sample A Female 18.6
Sample B Female 18.6
Sample C Male 19.9
Sample D Male 23.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.2
Samples: 4

Max nTPM: 15.8
Min nTPM: 14.4
Sample A Male 15.8
Sample B Male 15.3
Sample C Female 14.4
Sample D Female 15.3
Hippocampal formation
nTPM: 15.1
Samples: 4

Max nTPM: 17.2
Min nTPM: 13.3
Sample A Male 14.3
Sample B Male 15.4
Sample C Female 17.2
Sample D Female 13.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
74821831 Antisense, RP_060321_02_D11, Mouse strain C57BL/6J (56 days, male) 0.1

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