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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA027142
Pigment epithelial cells
Not detected
Photoreceptor cells
High
Limiting membrane
Not detected
Outer plexiform layer
Not detected
Inner nuclear layer
Not detected
Inner plexiform layer
Not detected
Ganglion cells
Not detected
Nerve fiber layer
Not detected
RETINA - Extended tissue profilei
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA030332
Pigment epithelial cells
Not detected
Photoreceptor cells
High
Limiting membrane
Not detected
Outer plexiform layer
Not detected
Inner nuclear layer
Not detected
Inner plexiform layer
Not detected
Ganglion cells
Not detected
Nerve fiber layer
Not detected
RETINA - Extended tissue profilei
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA030333
Pigment epithelial cells
Not detected
Photoreceptor cells
High
Limiting membrane
Not detected
Outer plexiform layer
Not detected
Inner nuclear layer
Not detected
Inner plexiform layer
Not detected
Ganglion cells
Not detected
Nerve fiber layer
Not detected
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 1072.0
Min nTPM: 266.4
Std nTPM: 180.2
Median nTPM: 0.0
415_1
77 years, female
1072.0
217_1
76 years, male
1034.4
490_1
67 years, female
999.2
246_1
77 years, male
991.5
526_1
61 years, male
981.5
414_1
84 years, female
978.0
43_1
64 years, female
972.7
324_1
76 years, male
951.5
162_1
79 years, female
923.7
126_1
63 years, male
905.1
352_1
62 years, male
903.3
468_1
89 years, male
901.6
32_1
67 years, male
899.2
466_1
57 years, female
899.2
229_1
69 years, female
894.1
117_1
61 years, male
873.4
6_1
73 years, female
842.5
491_1
89 years, female
832.0
499_1
55 years, female
829.4
81_1
67 years, male
824.8
348_1
84 years, male
817.2
311_1
78 years, male
814.3
495_1
57 years, female
813.1
386_1
76 years, male
809.2
115_1
83 years, male
807.3
447_1
81 years, male
802.4
316_1
62 years, male
796.2
347_1
72 years, male
794.8
149_1
88 years, male
794.4
35_1
74 years, female
790.0
321_1
62 years, female
787.2
153_1
70 years, female
771.8
355_1
70 years, female
766.7
251_1
78 years, male
764.0
266_1
85 years, male
763.3
142_1
61 years, female
754.4
315_1
62 years, female
752.8
9_1
66 years, female
752.6
425_1
59 years, female
748.8
237_1
82 years, male
747.5
18_1
88 years, male
744.6
518_1
75 years, female
742.0
405_1
91 years, male
733.9
413_1
59 years, female
721.0
172_1
72 years, female
717.5
389_1
86 years, female
706.7
139_1
64 years, female
705.1
265_1
87 years, male
695.0
319_1
81 years, male
693.0
2_1
77 years, female
692.9
350_1
84 years, female
684.2
503_1
68 years, male
671.1
377_1
82 years, female
667.4
292_1
71 years, male
656.8
99_1
64 years, male
650.4
375_1
74 years, female
650.1
335_1
73 years, female
649.0
189_1
76 years, male
645.5
89_1
63 years, male
637.3
406_1
79 years, male
633.9
313_1
79 years, female
631.4
286_1
68 years, female
631.0
293_1
68 years, female
621.6
356_1
87 years, female
621.0
349_1
83 years, male
610.2
376_1
75 years, female
605.4
404_1
82 years, female
599.3
354_1
81 years, female
594.8
243_1
75 years, male
591.1
517_1
88 years, male
584.7
17_1
71 years, male
574.4
396_1
62 years, male
573.4
379_1
60 years, male
571.1
254_1
77 years, female
568.5
145_1
84 years, male
565.1
322_1
76 years, male
563.0
307_1
66 years, female
560.8
480_1
63 years, male
553.4
318_1
68 years, male
553.3
177_1
74 years, male
545.8
291_1
76 years, male
545.0
218_1
71 years, female
542.3
109_1
81 years, female
541.8
137_1
83 years, male
527.5
42_1
85 years, male
520.5
120_1
70 years, female
511.3
163_1
78 years, male
502.3
320_1
89 years, female
501.6
384_1
83 years, male
501.4
173_1
67 years, male
483.1
353_1
82 years, female
462.9
119_1
70 years, female
455.3
394_1
75 years, female
439.2
351_1
91 years, male
432.1
4_1
88 years, female
427.1
317_1
60 years, male
397.2
264_1
73 years, female
385.9
308_1
70 years, female
379.2
288_1
66 years, female
369.8
314_1
67 years, male
359.7
41_1
94 years, female
356.8
501_1
88 years, male
351.5
506_1
65 years, male
303.2
295_1
61 years, female
284.1
452_1
88 years, female
266.4
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.