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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:8.1 nTPM
HPA:8.1 nTPM
GTEx:7.8 nTPM
FANTOM5:20.8 Scaled Tags Per Million
Pig:17.9 nTPM
Mouse:22.7 nTPM
Allen mouse:2.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA076196
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 8.1
Sample id Sample description nTPM
Hippocampus
nTPM: 5.5
1898 Male, age 80, left hemisphere 8.1
2621 Female, age 67, right hemisphere 6.3
2148 Female, age 91, left hemisphere 5.5
1911 Female, age 85, right hemisphere 5.0
1855 Male, age 76, left hemisphere 4.8
2529 Female, age 94, left hemisphere 3.5
Dentate gyrus
nTPM: 6.0
1927 Female, age 91, both hemispheres 8.2
2530 Female, age 94, left hemisphere 8.1
2528 Male, age 74, both hemispheres 6.1
2010 Male, age 76, both hemispheres 5.5
2246 Female, age 85, both hemispheres 4.2
2531 Female, age 67, both hemispheres 3.9
Entorhinal gyrus
nTPM: 6.5
2764 Male, age 80, right hemisphere 8.4
2613 Female, age 94, left hemisphere 7.7
1938 Female, age 85, left hemisphere 6.5
1787 Male, age 76, left hemisphere 6.4
2117 Female, age 91, right hemisphere 5.4
2686 Male, age 75, right hemisphere 4.9
Hippocampus, CA1
nTPM: 7.0
2749 Male, age 80, left hemisphere 14.7
1873 Female, age 85, both hemispheres 5.8
2527 Male, age 74, both hemispheres 5.3
2082 Female, age 91, right hemisphere 5.1
2045 Male, age 76, both hemispheres 3.7
Hippocampus, CA2
nTPM: 6.5
1892 Male, age 76, both hemispheres 8.6
1963 Male, age 80, left hemisphere 8.4
2437 Female, age 94, left hemisphere 6.4
2249 Male, age 74, both hemispheres 5.8
2113 Female, age 91, right hemisphere 5.0
1940 Female, age 85, left hemisphere 4.8
Hippocampus, CA3
nTPM: 6.3
2137 Male, age 80, left hemisphere 10.9
1867 Male, age 76, both hemispheres 7.1
2436 Male, age 74, both hemispheres 5.9
2620 Female, age 94, left hemisphere 5.1
1891 Female, age 85, both hemispheres 4.5
2861 Female, age 67, both hemispheres 4.1
Parahippocampal cortex
nTPM: 6.0
1990 Female, age 91, right hemisphere 7.6
1850 Male, age 80, both hemispheres 7.4
2245 Female, age 91, both hemispheres 7.0
1933 Female, age 85, both hemispheres 6.4
2250 Female, age 67, right hemisphere 6.4
2693 Female, age 94, both hemispheres 5.7
2622 Female, age 67, right hemisphere 5.2
2018 Male, age 76, both hemispheres 5.0
2532 Female, age 72, left hemisphere 5.0
2692 Male, age 74, both hemispheres 4.5
Perirhinal gyrus
nTPM: 8.1
1847 Female, age 91, left hemisphere 11.7
1794 Male, age 80, right hemisphere 8.6
2521 Female, age 94, right hemisphere 8.4
1841 Female, age 85, right hemisphere 6.7
2848 Male, age 76, right hemisphere 5.0
Subiculum
nTPM: 5.5
1901 Male, age 80, both hemispheres 6.9
2438 Female, age 94, left hemisphere 6.4
1977 Female, age 85, both hemispheres 6.3
2042 Male, age 76, both hemispheres 4.5
2619 Male, age 74, both hemispheres 4.5
2729 Female, age 91, right hemisphere 4.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 7.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 7.8
Samples: 197

Max nTPM: 25.6
Min nTPM: 0.2
Std nTPM: 5.3
Median nTPM: 6.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 25.6
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 23.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 21.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 21.5
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 20.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 20.2
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 20.1
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 19.8
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 19.2
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 19.2
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 18.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.8
FF:10169-103B7 60 years, female 20.9
FF:10153-102I9 76 years, female 20.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.9
Samples: 4

Max nTPM: 22.8
Min nTPM: 15.3
Sample A Female 22.8
Sample B Female 18.0
Sample C Male 15.6
Sample D Male 15.3
Entorhinal cortex
nTPM: 16.8
Samples: 4

Max nTPM: 18.5
Min nTPM: 15.1
Sample A Female 18.0
Sample B Female 18.5
Sample C Male 15.4
Sample D Male 15.1
Subiculum
nTPM: 16.0
Samples: 4

Max nTPM: 19.9
Min nTPM: 14.4
Sample A Female 19.9
Sample B Female 14.8
Sample C Male 14.4
Sample D Male 14.8
Ventral hippocampus
nTPM: 17.0
Samples: 4

Max nTPM: 18.7
Min nTPM: 13.0
Sample A Female 18.7
Sample B Female 13.0
Sample C Male 18.5
Sample D Male 17.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 22.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.7
Samples: 4

Max nTPM: 27.5
Min nTPM: 17.2
Sample A Male 27.5
Sample B Male 22.7
Sample C Female 23.4
Sample D Female 17.2
Hippocampal formation
nTPM: 18.0
Samples: 4

Max nTPM: 19.4
Min nTPM: 15.6
Sample A Male 19.4
Sample B Male 17.7
Sample C Female 15.6
Sample D Female 19.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.1
77371771 Antisense, RP_070116_01_D09, Mouse strain C57BL/6J (56 days, male) 2.5
80472074 Antisense, RP_070219_01_C07, Mouse strain C57BL/6J (56 days, male) 1.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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