Brain tissue expression of TTC1 in retina

RETINA - Expression summary

Protein expressionⁱ

No data

RNA expressionⁱ

Consensus:	42.9	nTPM
GTEx:	42.9	nTPM
FANTOM5:	55.7	Scaled Tags Per Million

Pig:	18.5	nTPM
Mouse:	63.6	nTPM

RETINA - GTEx RNA-seqⁱ

Average nTPM	42.9

GTEx sample id

Sample description

nTPM

Retina
Average nTPM: 42.9

Samples: 105

Max nTPM: 55.7
Min nTPM: 29.0
Std nTPM: 6.1
Median nTPM:

308_1	70 years, female	55.7
266_1	85 years, male	55.3
324_1	76 years, male	55.3
414_1	84 years, female	54.6
375_1	74 years, female	53.7
229_1	69 years, female	53.3
415_1	77 years, female	53.2
41_1	94 years, female	52.7
466_1	57 years, female	52.3
246_1	77 years, male	52.2
89_1	63 years, male	51.5
315_1	62 years, female	51.0
189_1	76 years, male	50.9
243_1	75 years, male	50.5
237_1	82 years, male	50.2
413_1	59 years, female	50.2
265_1	87 years, male	49.7
377_1	82 years, female	49.2
120_1	70 years, female	48.7
307_1	66 years, female	48.7
499_1	55 years, female	48.5
384_1	83 years, male	48.4
162_1	79 years, female	48.2
35_1	74 years, female	48.1
396_1	62 years, male	48.0
490_1	67 years, female	48.0
126_1	63 years, male	47.8
404_1	82 years, female	47.6
177_1	74 years, male	47.4
149_1	88 years, male	47.1
386_1	76 years, male	46.8
254_1	77 years, female	46.5
81_1	67 years, male	46.4
142_1	61 years, female	46.4
468_1	89 years, male	46.2
526_1	61 years, male	46.2
501_1	88 years, male	45.5
2_1	77 years, female	45.2
153_1	70 years, female	45.2
119_1	70 years, female	45.1
139_1	64 years, female	44.3
495_1	57 years, female	44.1
447_1	81 years, male	43.6
9_1	66 years, female	43.5
311_1	78 years, male	43.5
379_1	60 years, male	43.2
117_1	61 years, male	43.1
32_1	67 years, male	42.9
389_1	86 years, female	42.9
115_1	83 years, male	42.4
251_1	78 years, male	42.4
376_1	75 years, female	42.3
99_1	64 years, male	42.1
145_1	84 years, male	42.0
173_1	67 years, male	42.0
17_1	71 years, male	41.8
335_1	73 years, female	41.7
347_1	72 years, male	41.7
18_1	88 years, male	41.3
425_1	59 years, female	41.3
42_1	85 years, male	41.2
317_1	60 years, male	41.2
292_1	71 years, male	41.0
405_1	91 years, male	40.9
355_1	70 years, female	40.6
491_1	89 years, female	40.6
218_1	71 years, female	40.5
406_1	79 years, male	40.5
350_1	84 years, female	40.2
286_1	68 years, female	39.9
109_1	81 years, female	39.8
313_1	79 years, female	39.6
319_1	81 years, male	39.4
43_1	64 years, female	39.2
480_1	63 years, male	39.1
6_1	73 years, female	39.0
518_1	75 years, female	38.7
4_1	88 years, female	38.6
314_1	67 years, male	38.3
318_1	68 years, male	38.2
517_1	88 years, male	38.2
394_1	75 years, female	38.1
172_1	72 years, female	38.0
353_1	82 years, female	37.6
349_1	83 years, male	37.5
293_1	68 years, female	37.3
137_1	83 years, male	37.1
163_1	78 years, male	37.0
217_1	76 years, male	37.0
291_1	76 years, male	36.9
295_1	61 years, female	36.8
356_1	87 years, female	36.4
452_1	88 years, female	36.2
264_1	73 years, female	36.1
348_1	84 years, male	35.9
503_1	68 years, male	35.9
321_1	62 years, female	34.9
288_1	66 years, female	34.2
354_1	81 years, female	33.4
322_1	76 years, male	33.1
351_1	91 years, male	32.8
316_1	62 years, male	32.1
506_1	65 years, male	31.7
320_1	89 years, female	29.6
352_1	62 years, male	29.0
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RETINA - FANTOM5 CAGEⁱ

Max Scaled Tags Per Million	55.7

FANTOM5 sample id

Sample description

Scaled Tags Per Million

Retina
Scaled Tags Per Million: 55.7

FF:10030-101E3

24-65 years, mixed

55.7

RETINA - Pig RNA-seqⁱ

Average nTPM	18.5

Pig sample

Sample description

nTPM

Retina
nTPM: 18.5

Samples: 4

Max nTPM: 19.2
Min nTPM: 17.5

Sample A	Female	18.3
Sample B	Female	17.5
Sample C	Male	18.9
Sample D	Male	19.2

RETINA - Mouse RNA-seqⁱ

Average nTPM	63.6

Mouse sample

Sample description

nTPM

Retina
nTPM: 63.6

Samples: 4

Max nTPM: 64.1
Min nTPM: 62.3

Sample A	Male	64.1
Sample B	Male	63.8
Sample C	Female	64.1
Sample D	Female	62.3