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DPYSL3
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:94.2 nTPM
HPA:94.2 nTPM
GTEx:54.1 nTPM
FANTOM5:58.2 Scaled Tags Per Million
Pig:63.4 nTPM
Mouse:35.6 nTPM
Allen mouse:1.1 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 94.2
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 55.9
2828 Female, age 72, unknown 72.1
1870 Female, age 42, unknown 68.3
1827 Male, age 72, unknown 61.1
2666 Male, age 74, left hemisphere 60.8
2586 Male, age 75, left hemisphere 60.5
2411 Female, age 72, unknown 54.1
1830 Male, age 51, unknown 54.0
1833 Male, age 53, unknown 51.3
2219 Male, age 76, both hemispheres 49.9
2019 Male, age 18, unknown 27.2
Dorsal raphe nucleus
nTPM: 77.9
2047 Male, age 72, unknown 97.7
2298 Female, age 72, unknown 83.1
2016 Female, age 72, unknown 81.2
2750 Male, age 76, both hemispheres 66.1
1828 Male, age 53, unknown 61.5
Inferior colliculus
nTPM: 50.7
1848 Female, age 42, unknown 59.3
2849 Male, age 72, unknown 51.0
2097 Female, age 72, unknown 46.4
1890 Male, age 53, unknown 46.0
Median raphe nucleus
nTPM: 94.2
2220 Male, age 76, midline 94.2
Pedunculopontine tegmental nucleus
nTPM: 58.1
2334 Male, age 80, both hemispheres 62.1
2338 Male, age 61, both hemispheres 60.5
1921 Female, age 85, both hemispheres 51.7
Periaquaductal grey, anterior
nTPM: 77.7
1947 Male, age 18, unknown 93.5
1795 Male, age 51, unknown 81.2
2502 Female, age 75, unknown 58.3
Periaquaductal grey, dorsal
nTPM: 68.9
1840 Male, age 53, unknown 81.3
2850 Male, age 76, both hemispheres 77.8
1831 Male, age 72, unknown 64.4
2464 Female, age 72, unknown 52.2
Periaquaductal grey, lateral
nTPM: 78.6
2053 Male, age 18, unknown 98.1
2140 Male, age 76, both hemispheres 74.2
2272 Male, age 74, both hemispheres 63.6
Pretectal area
nTPM: 58.9
2825 Male, age 18, unknown 98.4
2273 Male, age 74, both hemispheres 84.6
2224 Female, age 72, unknown 82.5
2407 Male, age 75, both hemispheres 65.3
2667 Female, age 75, unknown 61.7
2316 Male, age 76, right hemisphere 56.3
1944 Female, age 72, unknown 46.6
1815 Male, age 53, unknown 45.1
1816 Male, age 51, unknown 41.5
2007 Male, age 72, unknown 35.0
1817 Female, age 42, unknown 31.4
Red nucleus
nTPM: 39.1
2584 Male, age 75, left hemisphere 51.6
2725 Female, age 75, unknown 50.9
2503 Female, age 72, unknown 43.3
2769 Male, age 72, unknown 41.3
2227 Male, age 72, unknown 40.8
2588 Male, age 74, left hemisphere 37.8
1954 Female, age 42, unknown 37.5
1821 Female, age 72, unknown 37.1
1865 Male, age 51, unknown 35.9
1904 Male, age 53, unknown 33.5
2823 Male, age 76, right hemisphere 31.9
2785 Male, age 18, unknown 27.6
Substantia nigra
nTPM: 71.2
2699 Male, age 18, unknown 108.2
1916 Female, age 42, unknown 91.2
1851 Male, age 51, unknown 77.3
1941 Male, age 53, unknown 73.4
2241 Male, age 72, unknown 69.3
2590 Female, age 75, unknown 67.8
2583 Male, age 75, right hemisphere 64.2
2409 Female, age 72, unknown 57.9
2665 Male, age 74, both hemispheres 54.7
1889 Female, age 72, unknown 47.8
Superior colliculus
nTPM: 57.6
2664 Male, age 75, both hemispheres 74.0
1796 Male, age 53, unknown 72.3
1839 Male, age 51, unknown 63.4
2261 Male, age 18, unknown 63.2
2587 Male, age 74, left hemisphere 59.6
1913 Female, age 42, unknown 56.0
1995 Male, age 72, unknown 54.5
2668 Female, age 75, unknown 45.1
2087 Female, age 72, unknown 45.0
1895 Male, age 76, right hemisphere 42.7
Ventral tegmental area
nTPM: 75.4
2021 Male, age 53, unknown 94.8
1915 Female, age 42, unknown 92.3
1942 Male, age 51, unknown 77.5
2223 Female, age 72, unknown 68.4
2218 Male, age 76, both hemispheres 61.1
2410 Female, age 72, unknown 58.2

MIDBRAIN - GTEx RNA-seqi
Average nTPM 54.1
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 54.1
Samples: 139

Max nTPM: 117.3
Min nTPM: 18.2
Std nTPM: 15.6
Median nTPM: 52.0
GTEX-1LVAO-0011-R2a-SM-EYYX1 60-69 years, male 117.3
GTEX-1IGQW-0011-R2b-SM-D4P26 60-69 years, male 103.1
GTEX-13NYS-0011-R2b-SM-5MR4G 60-69 years, male 99.4
GTEX-1H3VE-0011-R2a-SM-CE6SA 40-49 years, male 98.0
GTEX-1C6VR-0011-R2a-SM-7RHGZ 60-69 years, male 89.6
GTEX-1JMQK-0011-R2a-SM-EYYXQ 60-69 years, male 87.9
GTEX-1F48J-0011-R2a-SM-CL535 50-59 years, female 86.7
GTEX-14BIM-0011-R2b-SM-69LQ6 60-69 years, female 85.0
GTEX-13X6K-0011-R2b-SM-5P9K3 60-69 years, female 78.9
GTEX-12WSA-0011-R2a-SM-57WDK 60-69 years, male 73.6
GTEX-1IKJJ-0011-R2b-SM-ARZLJ 60-69 years, male 72.6
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 58.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 58.2
FF:10158-103A5 76 years, female 58.2

MIDBRAIN - Pig RNA-seqi
Average nTPM 63.4
Pig sample Sample description nTPM
Midbrain
nTPM: 52.7
Samples: 4

Max nTPM: 113.9
Min nTPM: 26.6
Sample A Female 113.9
Sample B Female 26.6
Sample C Male 39.4
Sample D Male 30.8
Periaqueductal gray
nTPM: 39.2
Samples: 3

Max nTPM: 51.2
Min nTPM: 26.4
Sample B Female 26.4
Sample C Male 51.2
Sample D Male 40.1
Substantia nigra
nTPM: 63.4
Samples: 4

Max nTPM: 78.6
Min nTPM: 43.3
Sample A Female 75.9
Sample B Female 55.8
Sample C Male 78.6
Sample D Male 43.3
Superior colliculi
nTPM: 47.2
Samples: 4

Max nTPM: 70.0
Min nTPM: 35.2
Sample A Female 44.2
Sample B Female 70.0
Sample C Male 35.2
Sample D Male 39.5

MIDBRAIN - Mouse RNA-seqi
Average nTPM 35.6
Mouse sample Sample description nTPM
Midbrain
nTPM: 35.6
Samples: 4

Max nTPM: 38.2
Min nTPM: 31.5
Sample A Male 31.5
Sample B Male 37.2
Sample C Female 38.2
Sample D Female 35.3

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 1.1
71608207 Antisense, RP_050927_01_B03, Mouse strain C57BL/6J (56 days, male) 2.1
654928 Antisense, RP_040922_01_B02, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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