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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
For selected proteins extended tissue profiling is performed in addition to standard tissue microarrays. The section below contains results from the extended profiling.
, antibody HPA045393
Pigment epithelial cells
Not detected
Photoreceptor cells
High
Limiting membrane
Not detected
Outer plexiform layer
Not detected
Inner nuclear layer
Not detected
Inner plexiform layer
Not detected
Ganglion cells
Not detected
Nerve fiber layer
Not detected
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 2905.6
Min nTPM: 107.1
Std nTPM: 587.5
Median nTPM: 0.0
352_1
62 years, male
2905.6
319_1
81 years, male
2476.9
354_1
81 years, female
2386.1
218_1
71 years, female
2369.6
172_1
72 years, female
2243.6
163_1
78 years, male
2096.6
321_1
62 years, female
2087.6
425_1
59 years, female
1965.2
386_1
76 years, male
1911.4
356_1
87 years, female
1898.2
353_1
82 years, female
1857.0
350_1
84 years, female
1845.3
377_1
82 years, female
1749.7
349_1
83 years, male
1745.8
355_1
70 years, female
1743.1
243_1
75 years, male
1727.9
447_1
81 years, male
1694.8
376_1
75 years, female
1677.3
480_1
63 years, male
1676.1
335_1
73 years, female
1666.4
394_1
75 years, female
1662.3
286_1
68 years, female
1650.0
320_1
89 years, female
1627.8
293_1
68 years, female
1621.4
292_1
71 years, male
1621.3
316_1
62 years, male
1618.6
6_1
73 years, female
1611.5
406_1
79 years, male
1585.2
318_1
68 years, male
1581.4
503_1
68 years, male
1578.9
177_1
74 years, male
1457.0
404_1
82 years, female
1417.9
229_1
69 years, female
1394.5
351_1
91 years, male
1394.2
322_1
76 years, male
1389.2
251_1
78 years, male
1388.1
237_1
82 years, male
1382.8
379_1
60 years, male
1355.5
189_1
76 years, male
1338.9
526_1
61 years, male
1332.4
389_1
86 years, female
1331.7
405_1
91 years, male
1302.3
375_1
74 years, female
1293.8
246_1
77 years, male
1272.3
2_1
77 years, female
1226.3
517_1
88 years, male
1203.7
348_1
84 years, male
1163.0
384_1
83 years, male
1072.4
317_1
60 years, male
1070.9
291_1
76 years, male
1070.2
347_1
72 years, male
1059.9
295_1
61 years, female
1038.2
115_1
83 years, male
1019.3
266_1
85 years, male
1018.5
506_1
65 years, male
1017.1
468_1
89 years, male
990.8
264_1
73 years, female
969.4
452_1
88 years, female
959.2
396_1
62 years, male
935.1
265_1
87 years, male
918.6
9_1
66 years, female
910.5
254_1
77 years, female
904.9
153_1
70 years, female
898.2
173_1
67 years, male
881.0
126_1
63 years, male
863.0
217_1
76 years, male
857.7
518_1
75 years, female
838.6
137_1
83 years, male
825.0
145_1
84 years, male
810.9
324_1
76 years, male
809.3
4_1
88 years, female
795.1
311_1
78 years, male
786.9
17_1
71 years, male
778.2
35_1
74 years, female
771.9
499_1
55 years, female
771.0
18_1
88 years, male
681.8
307_1
66 years, female
673.5
81_1
67 years, male
652.4
288_1
66 years, female
651.2
117_1
61 years, male
634.6
120_1
70 years, female
599.9
99_1
64 years, male
573.7
109_1
81 years, female
561.9
314_1
67 years, male
553.7
313_1
79 years, female
542.8
142_1
61 years, female
539.5
43_1
64 years, female
528.4
41_1
94 years, female
508.9
162_1
79 years, female
478.6
32_1
67 years, male
474.8
139_1
64 years, female
460.4
315_1
62 years, female
453.7
415_1
77 years, female
449.1
42_1
85 years, male
432.4
308_1
70 years, female
408.8
495_1
57 years, female
400.2
414_1
84 years, female
385.2
466_1
57 years, female
379.1
119_1
70 years, female
308.9
89_1
63 years, male
263.0
149_1
88 years, male
236.7
490_1
67 years, female
184.9
501_1
88 years, male
179.5
413_1
59 years, female
147.2
491_1
89 years, female
107.1
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.