ABOUTMENU
HELP
NEWS
NCL
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:115.9 nTPM
HPA:115.9 nTPM
GTEx:144.4 nTPM
FANTOM5:433.2 Scaled Tags Per Million
Pig:100.0 nTPM
Mouse:27.1 nTPM
Allen mouse:19.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023981Antibody CAB004210
Glial cells HighHigh
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 115.9
Sample id Sample description nTPM
Hippocampus
nTPM: 114.4
2621 Female, age 67, right hemisphere 125.3
2529 Female, age 94, left hemisphere 121.6
1855 Male, age 76, left hemisphere 112.0
1898 Male, age 80, left hemisphere 111.5
2148 Female, age 91, left hemisphere 110.1
1911 Female, age 85, right hemisphere 106.1
Dentate gyrus
nTPM: 115.9
2530 Female, age 94, left hemisphere 145.7
2531 Female, age 67, both hemispheres 122.3
2246 Female, age 85, both hemispheres 116.2
2010 Male, age 76, both hemispheres 108.4
2528 Male, age 74, both hemispheres 104.0
1927 Female, age 91, both hemispheres 98.7
Entorhinal gyrus
nTPM: 115.8
2686 Male, age 75, right hemisphere 122.8
2117 Female, age 91, right hemisphere 119.3
1938 Female, age 85, left hemisphere 115.4
2764 Male, age 80, right hemisphere 114.3
2613 Female, age 94, left hemisphere 113.7
1787 Male, age 76, left hemisphere 109.1
Hippocampus, CA1
nTPM: 108.5
2749 Male, age 80, left hemisphere 116.7
2527 Male, age 74, both hemispheres 115.9
1873 Female, age 85, both hemispheres 108.6
2045 Male, age 76, both hemispheres 101.6
2082 Female, age 91, right hemisphere 100.0
Hippocampus, CA2
nTPM: 109.3
1892 Male, age 76, both hemispheres 118.4
2437 Female, age 94, left hemisphere 115.8
1963 Male, age 80, left hemisphere 108.0
2113 Female, age 91, right hemisphere 105.7
1940 Female, age 85, left hemisphere 105.6
2249 Male, age 74, both hemispheres 102.4
Hippocampus, CA3
nTPM: 105.2
1867 Male, age 76, both hemispheres 111.2
2137 Male, age 80, left hemisphere 111.2
1891 Female, age 85, both hemispheres 110.1
2861 Female, age 67, both hemispheres 102.5
2436 Male, age 74, both hemispheres 100.5
2620 Female, age 94, left hemisphere 95.7
Parahippocampal cortex
nTPM: 113.0
2532 Female, age 72, left hemisphere 131.3
2245 Female, age 91, both hemispheres 130.1
2692 Male, age 74, both hemispheres 114.1
1850 Male, age 80, both hemispheres 113.3
2622 Female, age 67, right hemisphere 111.2
1990 Female, age 91, right hemisphere 110.0
1933 Female, age 85, both hemispheres 109.5
2250 Female, age 67, right hemisphere 108.1
2018 Male, age 76, both hemispheres 106.8
2693 Female, age 94, both hemispheres 95.4
Perirhinal gyrus
nTPM: 106.1
1841 Female, age 85, right hemisphere 108.8
2848 Male, age 76, right hemisphere 108.6
1847 Female, age 91, left hemisphere 105.6
1794 Male, age 80, right hemisphere 104.4
2521 Female, age 94, right hemisphere 103.1
Subiculum
nTPM: 115.1
2438 Female, age 94, left hemisphere 135.7
1901 Male, age 80, both hemispheres 120.8
1977 Female, age 85, both hemispheres 115.1
2619 Male, age 74, both hemispheres 113.0
2042 Male, age 76, both hemispheres 110.7
2729 Female, age 91, right hemisphere 95.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 144.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 144.4
Samples: 197

Max nTPM: 281.2
Min nTPM: 77.2
Std nTPM: 29.9
Median nTPM: 140.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 281.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 272.6
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 261.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 243.4
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 230.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 223.6
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 219.8
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 214.9
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 201.5
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 201.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 187.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 433.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 433.2
FF:10169-103B7 60 years, female 439.4
FF:10153-102I9 76 years, female 426.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 100.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 100.0
Samples: 4

Max nTPM: 125.4
Min nTPM: 79.2
Sample A Female 125.4
Sample B Female 90.1
Sample C Male 105.3
Sample D Male 79.2
Entorhinal cortex
nTPM: 76.7
Samples: 4

Max nTPM: 87.0
Min nTPM: 69.9
Sample A Female 78.0
Sample B Female 87.0
Sample C Male 69.9
Sample D Male 72.0
Subiculum
nTPM: 85.1
Samples: 4

Max nTPM: 110.6
Min nTPM: 74.7
Sample A Female 110.6
Sample B Female 76.6
Sample C Male 74.7
Sample D Male 78.4
Ventral hippocampus
nTPM: 86.3
Samples: 4

Max nTPM: 100.0
Min nTPM: 67.4
Sample A Female 87.4
Sample B Female 67.4
Sample C Male 90.3
Sample D Male 100.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 27.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.1
Samples: 4

Max nTPM: 31.3
Min nTPM: 24.6
Sample A Male 26.9
Sample B Male 24.6
Sample C Female 25.4
Sample D Female 31.3
Hippocampal formation
nTPM: 25.6
Samples: 4

Max nTPM: 28.1
Min nTPM: 22.4
Sample A Male 24.4
Sample B Male 27.5
Sample C Female 28.1
Sample D Female 22.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 19.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.4
68442979 Antisense, RP_050111_01_B06, Mouse strain C57BL/6J (56 days, male) 19.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.