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MPV17
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:57.1 nTPM
HPA:57.1 nTPM
GTEx:45.9 nTPM
FANTOM5:36.7 Scaled Tags Per Million
Pig:10.5 nTPM
Mouse:52.5 nTPM
Allen mouse:1.4 Expression energy

MIDBRAIN - Annotated protein expression
Pending normal tissue analysis

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 57.1
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 55.3
2019 Male, age 18, unknown 57.8
1870 Female, age 42, unknown 57.7
1827 Male, age 72, unknown 56.8
2828 Female, age 72, unknown 56.7
2411 Female, age 72, unknown 55.8
1830 Male, age 51, unknown 55.1
1833 Male, age 53, unknown 54.7
2219 Male, age 76, both hemispheres 54.0
2666 Male, age 74, left hemisphere 52.4
2586 Male, age 75, left hemisphere 51.7
Dorsal raphe nucleus
nTPM: 54.6
2298 Female, age 72, unknown 57.1
2750 Male, age 76, both hemispheres 56.1
1828 Male, age 53, unknown 53.8
2047 Male, age 72, unknown 53.5
2016 Female, age 72, unknown 52.6
Inferior colliculus
nTPM: 55.5
2097 Female, age 72, unknown 58.2
1890 Male, age 53, unknown 56.3
1848 Female, age 42, unknown 54.9
2849 Male, age 72, unknown 52.4
Median raphe nucleus
nTPM: 55.9
2220 Male, age 76, midline 55.9
Pedunculopontine tegmental nucleus
nTPM: 57.0
2338 Male, age 61, both hemispheres 59.9
2334 Male, age 80, both hemispheres 56.4
1921 Female, age 85, both hemispheres 54.6
Periaquaductal grey, anterior
nTPM: 54.7
2502 Female, age 75, unknown 56.0
1947 Male, age 18, unknown 54.9
1795 Male, age 51, unknown 53.2
Periaquaductal grey, dorsal
nTPM: 54.0
1840 Male, age 53, unknown 54.5
2464 Female, age 72, unknown 54.5
1831 Male, age 72, unknown 54.1
2850 Male, age 76, both hemispheres 52.7
Periaquaductal grey, lateral
nTPM: 54.9
2272 Male, age 74, both hemispheres 56.3
2053 Male, age 18, unknown 55.5
2140 Male, age 76, both hemispheres 52.8
Pretectal area
nTPM: 57.1
1944 Female, age 72, unknown 59.1
2667 Female, age 75, unknown 58.5
2007 Male, age 72, unknown 58.2
1816 Male, age 51, unknown 58.0
2273 Male, age 74, both hemispheres 57.8
1817 Female, age 42, unknown 57.2
2407 Male, age 75, both hemispheres 56.9
1815 Male, age 53, unknown 56.8
2224 Female, age 72, unknown 56.1
2825 Male, age 18, unknown 54.7
2316 Male, age 76, right hemisphere 54.4
Red nucleus
nTPM: 57.0
1821 Female, age 72, unknown 60.5
1865 Male, age 51, unknown 59.4
2227 Male, age 72, unknown 58.8
2823 Male, age 76, right hemisphere 58.6
1954 Female, age 42, unknown 57.9
1904 Male, age 53, unknown 57.3
2769 Male, age 72, unknown 57.1
2785 Male, age 18, unknown 56.8
2503 Female, age 72, unknown 56.4
2588 Male, age 74, left hemisphere 53.7
2725 Female, age 75, unknown 53.6
2584 Male, age 75, left hemisphere 53.4
Substantia nigra
nTPM: 56.0
1916 Female, age 42, unknown 59.2
1941 Male, age 53, unknown 57.6
1889 Female, age 72, unknown 57.5
1851 Male, age 51, unknown 56.8
2590 Female, age 75, unknown 56.8
2241 Male, age 72, unknown 55.5
2409 Female, age 72, unknown 55.2
2583 Male, age 75, right hemisphere 54.1
2699 Male, age 18, unknown 53.9
2665 Male, age 74, both hemispheres 53.8
Superior colliculus
nTPM: 55.5
2587 Male, age 74, left hemisphere 56.9
2261 Male, age 18, unknown 56.6
1895 Male, age 76, right hemisphere 56.3
1913 Female, age 42, unknown 56.1
2087 Female, age 72, unknown 55.9
1796 Male, age 53, unknown 55.7
1995 Male, age 72, unknown 55.5
2668 Female, age 75, unknown 55.2
1839 Male, age 51, unknown 54.6
2664 Male, age 75, both hemispheres 52.6
Ventral tegmental area
nTPM: 55.3
2410 Female, age 72, unknown 57.8
1915 Female, age 42, unknown 55.8
2223 Female, age 72, unknown 55.8
2218 Male, age 76, both hemispheres 55.5
1942 Male, age 51, unknown 53.9
2021 Male, age 53, unknown 53.2

MIDBRAIN - GTEx RNA-seqi
Average nTPM 45.9
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 45.9
Samples: 139

Max nTPM: 70.6
Min nTPM: 26.9
Std nTPM: 8.4
Median nTPM: 45.5
GTEX-13O3Q-0011-R2b-SM-5KM3K 50-59 years, male 70.6
GTEX-1IGQW-0011-R2b-SM-D4P26 60-69 years, male 69.4
GTEX-1LVA9-0011-R2a-SM-EZ6MJ 50-59 years, male 66.8
GTEX-13NYB-0011-R2a-SM-5MR3C 40-49 years, male 64.3
GTEX-1LVAO-0011-R2a-SM-EYYX1 60-69 years, male 63.6
GTEX-12ZZX-0011-R2a-SM-5EGLG 40-49 years, female 63.4
GTEX-1H3O1-0011-R2b-SM-CKZOT 60-69 years, male 62.2
GTEX-1EMGI-0011-R2b-SM-9OSVS 60-69 years, male 61.5
GTEX-1B933-0011-R2b-SM-7IGNM 50-59 years, female 60.9
GTEX-1F48J-0011-R2a-SM-CL535 50-59 years, female 58.3
GTEX-1A8G7-0011-R2a-SM-7IGQI 60-69 years, male 57.5
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 36.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 36.7
FF:10158-103A5 76 years, female 36.7

MIDBRAIN - Pig RNA-seqi
Average nTPM 10.5
Pig sample Sample description nTPM
Midbrain
nTPM: 10.3
Samples: 4

Max nTPM: 14.2
Min nTPM: 8.3
Sample A Female 14.2
Sample B Female 9.5
Sample C Male 8.3
Sample D Male 9.2
Periaqueductal gray
nTPM: 8.4
Samples: 3

Max nTPM: 9.8
Min nTPM: 7.2
Sample B Female 7.2
Sample C Male 8.2
Sample D Male 9.8
Substantia nigra
nTPM: 9.4
Samples: 4

Max nTPM: 13.2
Min nTPM: 6.5
Sample A Female 13.2
Sample B Female 6.5
Sample C Male 7.9
Sample D Male 10.0
Superior colliculi
nTPM: 10.5
Samples: 4

Max nTPM: 13.1
Min nTPM: 7.4
Sample A Female 13.1
Sample B Female 7.4
Sample C Male 10.3
Sample D Male 11.2

MIDBRAIN - Mouse RNA-seqi
Average nTPM 52.5
Mouse sample Sample description nTPM
Midbrain
nTPM: 52.6
Samples: 4

Max nTPM: 55.3
Min nTPM: 49.2
Sample A Male 55.3
Sample B Male 49.2
Sample C Female 51.7
Sample D Female 54.0

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 1.4
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 1.4
70525818 Antisense, RP_050317_04_F07, Mouse strain C57BL/6J (56 days, male) 1.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.