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LANCL1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:59.0 nTPM
HPA:59.0 nTPM
GTEx:81.1 nTPM
FANTOM5:83.2 Scaled Tags Per Million
Pig:76.3 nTPM
Mouse:156.9 nTPM
Allen mouse:15.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034994
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 59.0
Sample id Sample description nTPM
Hippocampus
nTPM: 52.0
1898 Male, age 80, left hemisphere 63.9
1855 Male, age 76, left hemisphere 57.3
1911 Female, age 85, right hemisphere 55.4
2621 Female, age 67, right hemisphere 51.2
2529 Female, age 94, left hemisphere 43.2
2148 Female, age 91, left hemisphere 40.9
Dentate gyrus
nTPM: 55.0
2010 Male, age 76, both hemispheres 65.9
2530 Female, age 94, left hemisphere 59.8
1927 Female, age 91, both hemispheres 56.6
2528 Male, age 74, both hemispheres 54.2
2246 Female, age 85, both hemispheres 52.1
2531 Female, age 67, both hemispheres 41.3
Entorhinal gyrus
nTPM: 53.9
2764 Male, age 80, right hemisphere 61.1
1938 Female, age 85, left hemisphere 58.3
2117 Female, age 91, right hemisphere 57.9
1787 Male, age 76, left hemisphere 56.1
2613 Female, age 94, left hemisphere 54.1
2686 Male, age 75, right hemisphere 35.7
Hippocampus, CA1
nTPM: 58.1
2749 Male, age 80, left hemisphere 77.2
1873 Female, age 85, both hemispheres 66.5
2045 Male, age 76, both hemispheres 59.0
2082 Female, age 91, right hemisphere 45.3
2527 Male, age 74, both hemispheres 42.5
Hippocampus, CA2
nTPM: 59.0
1892 Male, age 76, both hemispheres 78.6
1963 Male, age 80, left hemisphere 76.7
2249 Male, age 74, both hemispheres 56.9
2437 Female, age 94, left hemisphere 50.7
2113 Female, age 91, right hemisphere 46.1
1940 Female, age 85, left hemisphere 45.2
Hippocampus, CA3
nTPM: 50.8
1867 Male, age 76, both hemispheres 70.2
1891 Female, age 85, both hemispheres 65.9
2137 Male, age 80, left hemisphere 53.4
2620 Female, age 94, left hemisphere 51.6
2436 Male, age 74, both hemispheres 39.5
2861 Female, age 67, both hemispheres 24.5
Parahippocampal cortex
nTPM: 48.5
1850 Male, age 80, both hemispheres 63.4
1990 Female, age 91, right hemisphere 57.6
2018 Male, age 76, both hemispheres 53.3
1933 Female, age 85, both hemispheres 53.1
2693 Female, age 94, both hemispheres 51.5
2532 Female, age 72, left hemisphere 50.6
2245 Female, age 91, both hemispheres 45.3
2692 Male, age 74, both hemispheres 43.7
2250 Female, age 67, right hemisphere 41.8
2622 Female, age 67, right hemisphere 24.8
Perirhinal gyrus
nTPM: 57.3
1847 Female, age 91, left hemisphere 60.5
1794 Male, age 80, right hemisphere 59.1
1841 Female, age 85, right hemisphere 56.7
2848 Male, age 76, right hemisphere 56.0
2521 Female, age 94, right hemisphere 54.5
Subiculum
nTPM: 56.3
1977 Female, age 85, both hemispheres 67.5
1901 Male, age 80, both hemispheres 66.0
2042 Male, age 76, both hemispheres 62.0
2438 Female, age 94, left hemisphere 52.7
2619 Male, age 74, both hemispheres 46.1
2729 Female, age 91, right hemisphere 43.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 81.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 81.1
Samples: 197

Max nTPM: 197.9
Min nTPM: 12.9
Std nTPM: 30.6
Median nTPM: 77.8
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 197.9
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 174.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 165.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 160.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 157.3
GTEX-WZTO-0011-R1B-SM-3NMAR 40-49 years, male 152.9
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 146.4
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 137.2
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 136.6
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 135.3
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 134.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 83.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 83.2
FF:10169-103B7 60 years, female 84.7
FF:10153-102I9 76 years, female 81.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 76.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 76.3
Samples: 4

Max nTPM: 91.2
Min nTPM: 59.7
Sample A Female 91.2
Sample B Female 79.1
Sample C Male 75.3
Sample D Male 59.7
Entorhinal cortex
nTPM: 74.7
Samples: 4

Max nTPM: 85.5
Min nTPM: 66.9
Sample A Female 73.9
Sample B Female 85.5
Sample C Male 72.3
Sample D Male 66.9
Subiculum
nTPM: 73.8
Samples: 4

Max nTPM: 88.9
Min nTPM: 67.9
Sample A Female 88.9
Sample B Female 69.1
Sample C Male 69.4
Sample D Male 67.9
Ventral hippocampus
nTPM: 64.2
Samples: 4

Max nTPM: 74.3
Min nTPM: 53.1
Sample A Female 74.3
Sample B Female 53.1
Sample C Male 63.2
Sample D Male 66.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 156.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 149.7
Samples: 4

Max nTPM: 155.5
Min nTPM: 140.6
Sample A Male 140.6
Sample B Male 155.5
Sample C Female 149.7
Sample D Female 153.1
Hippocampal formation
nTPM: 156.9
Samples: 4

Max nTPM: 178.3
Min nTPM: 149.3
Sample A Male 178.3
Sample B Male 150.7
Sample C Female 149.3
Sample D Female 149.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.1
74881159 Antisense, RP_060220_01_A08, Mouse strain C57BL/6J (56 days, male) 16.0
2366 Antisense, RP_Baylor_102826, Mouse strain C57BL/6J (56 days, male) 14.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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