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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Low
RNA expressioni
Consensus:46.2 nTPM
HPA:46.2 nTPM
GTEx:31.6 nTPM
FANTOM5:31.2 Scaled Tags Per Million
Pig:15.8 nTPM
Mouse:53.5 nTPM
Allen mouse:2.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027009
Glial cells High
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 46.2
Sample id Sample description nTPM
Hippocampus
nTPM: 45.8
1911 Female, age 85, right hemisphere 47.7
1898 Male, age 80, left hemisphere 47.0
1855 Male, age 76, left hemisphere 45.7
2529 Female, age 94, left hemisphere 45.6
2148 Female, age 91, left hemisphere 44.5
2621 Female, age 67, right hemisphere 44.2
Dentate gyrus
nTPM: 45.2
2528 Male, age 74, both hemispheres 46.0
2010 Male, age 76, both hemispheres 45.9
1927 Female, age 91, both hemispheres 45.7
2246 Female, age 85, both hemispheres 45.2
2530 Female, age 94, left hemisphere 44.9
2531 Female, age 67, both hemispheres 43.3
Entorhinal gyrus
nTPM: 44.9
2117 Female, age 91, right hemisphere 46.9
1938 Female, age 85, left hemisphere 46.3
1787 Male, age 76, left hemisphere 45.3
2764 Male, age 80, right hemisphere 44.8
2686 Male, age 75, right hemisphere 43.5
2613 Female, age 94, left hemisphere 42.5
Hippocampus, CA1
nTPM: 45.7
2749 Male, age 80, left hemisphere 46.7
2527 Male, age 74, both hemispheres 46.4
1873 Female, age 85, both hemispheres 46.3
2045 Male, age 76, both hemispheres 45.0
2082 Female, age 91, right hemisphere 44.3
Hippocampus, CA2
nTPM: 46.1
2249 Male, age 74, both hemispheres 48.3
1963 Male, age 80, left hemisphere 47.3
1940 Female, age 85, left hemisphere 46.7
2437 Female, age 94, left hemisphere 45.1
2113 Female, age 91, right hemisphere 44.8
1892 Male, age 76, both hemispheres 44.4
Hippocampus, CA3
nTPM: 45.6
2436 Male, age 74, both hemispheres 47.6
1891 Female, age 85, both hemispheres 47.3
2137 Male, age 80, left hemisphere 46.3
1867 Male, age 76, both hemispheres 45.9
2620 Female, age 94, left hemisphere 44.4
2861 Female, age 67, both hemispheres 42.0
Parahippocampal cortex
nTPM: 44.9
1850 Male, age 80, both hemispheres 46.7
1990 Female, age 91, right hemisphere 46.6
1933 Female, age 85, both hemispheres 46.3
2018 Male, age 76, both hemispheres 45.3
2250 Female, age 67, right hemisphere 45.1
2532 Female, age 72, left hemisphere 44.9
2245 Female, age 91, both hemispheres 44.4
2693 Female, age 94, both hemispheres 44.1
2692 Male, age 74, both hemispheres 43.6
2622 Female, age 67, right hemisphere 42.2
Perirhinal gyrus
nTPM: 46.2
1841 Female, age 85, right hemisphere 47.0
1794 Male, age 80, right hemisphere 46.9
2848 Male, age 76, right hemisphere 45.9
1847 Female, age 91, left hemisphere 45.8
2521 Female, age 94, right hemisphere 45.3
Subiculum
nTPM: 46.1
1977 Female, age 85, both hemispheres 47.9
1901 Male, age 80, both hemispheres 46.9
2042 Male, age 76, both hemispheres 46.3
2438 Female, age 94, left hemisphere 45.8
2729 Female, age 91, right hemisphere 45.7
2619 Male, age 74, both hemispheres 43.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 31.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 31.6
Samples: 197

Max nTPM: 53.1
Min nTPM: 16.8
Std nTPM: 5.6
Median nTPM: 31.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 53.1
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 48.7
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 47.6
GTEX-1BAJH-0011-R1a-SM-7P8SV 70-79 years, male 47.6
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 45.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 42.9
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 42.6
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 42.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 42.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 41.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 41.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 31.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 31.2
FF:10169-103B7 60 years, female 31.3
FF:10153-102I9 76 years, female 31.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.8
Samples: 4

Max nTPM: 18.2
Min nTPM: 12.7
Sample A Female 18.2
Sample B Female 15.7
Sample C Male 16.6
Sample D Male 12.7
Entorhinal cortex
nTPM: 14.1
Samples: 4

Max nTPM: 17.3
Min nTPM: 10.9
Sample A Female 13.4
Sample B Female 17.3
Sample C Male 14.6
Sample D Male 10.9
Subiculum
nTPM: 13.8
Samples: 4

Max nTPM: 15.5
Min nTPM: 12.2
Sample A Female 15.5
Sample B Female 12.2
Sample C Male 12.9
Sample D Male 14.7
Ventral hippocampus
nTPM: 15.0
Samples: 4

Max nTPM: 16.4
Min nTPM: 12.6
Sample A Female 15.4
Sample B Female 12.6
Sample C Male 16.4
Sample D Male 15.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 53.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 48.6
Samples: 4

Max nTPM: 54.1
Min nTPM: 40.5
Sample A Male 47.3
Sample B Male 52.3
Sample C Female 54.1
Sample D Female 40.5
Hippocampal formation
nTPM: 53.5
Samples: 4

Max nTPM: 58.1
Min nTPM: 51.5
Sample A Male 58.1
Sample B Male 52.2
Sample C Female 51.5
Sample D Female 52.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.4
587429 Antisense, RP_040831_01_G03, Mouse strain C57BL/6J (56 days, male) 2.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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