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EFHD1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:196.6 nTPM
HPA:196.6 nTPM
GTEx:204.0 nTPM
FANTOM5:233.5 Scaled Tags Per Million
Pig:33.8 nTPM
Mouse:26.1 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049331Antibody HPA056959
Glial cells Not detectedNot detected
Neuronal cells LowNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 196.6
Sample id Sample description nTPM
Hippocampus
nTPM: 174.1
1911 Female, age 85, right hemisphere 187.4
1855 Male, age 76, left hemisphere 179.4
2529 Female, age 94, left hemisphere 178.0
2621 Female, age 67, right hemisphere 172.4
2148 Female, age 91, left hemisphere 164.0
1898 Male, age 80, left hemisphere 163.5
Dentate gyrus
nTPM: 172.3
2530 Female, age 94, left hemisphere 205.3
2528 Male, age 74, both hemispheres 183.1
2010 Male, age 76, both hemispheres 180.3
2246 Female, age 85, both hemispheres 170.2
2531 Female, age 67, both hemispheres 150.6
1927 Female, age 91, both hemispheres 144.6
Entorhinal gyrus
nTPM: 173.3
2117 Female, age 91, right hemisphere 197.3
2764 Male, age 80, right hemisphere 188.5
1787 Male, age 76, left hemisphere 172.8
1938 Female, age 85, left hemisphere 166.5
2686 Male, age 75, right hemisphere 157.7
2613 Female, age 94, left hemisphere 157.2
Hippocampus, CA1
nTPM: 163.4
2527 Male, age 74, both hemispheres 182.2
2082 Female, age 91, right hemisphere 176.4
1873 Female, age 85, both hemispheres 161.9
2045 Male, age 76, both hemispheres 152.1
2749 Male, age 80, left hemisphere 144.4
Hippocampus, CA2
nTPM: 169.6
2249 Male, age 74, both hemispheres 199.8
2113 Female, age 91, right hemisphere 174.6
1940 Female, age 85, left hemisphere 170.8
1963 Male, age 80, left hemisphere 164.3
2437 Female, age 94, left hemisphere 164.2
1892 Male, age 76, both hemispheres 143.7
Hippocampus, CA3
nTPM: 155.6
1891 Female, age 85, both hemispheres 194.9
2436 Male, age 74, both hemispheres 158.8
2620 Female, age 94, left hemisphere 152.6
1867 Male, age 76, both hemispheres 149.2
2861 Female, age 67, both hemispheres 143.3
2137 Male, age 80, left hemisphere 134.7
Parahippocampal cortex
nTPM: 167.8
2692 Male, age 74, both hemispheres 194.9
2532 Female, age 72, left hemisphere 183.4
1990 Female, age 91, right hemisphere 181.1
2018 Male, age 76, both hemispheres 179.0
2245 Female, age 91, both hemispheres 166.1
1933 Female, age 85, both hemispheres 160.5
1850 Male, age 80, both hemispheres 157.4
2622 Female, age 67, right hemisphere 154.6
2250 Female, age 67, right hemisphere 152.3
2693 Female, age 94, both hemispheres 149.1
Perirhinal gyrus
nTPM: 146.9
2848 Male, age 76, right hemisphere 158.3
2521 Female, age 94, right hemisphere 149.3
1794 Male, age 80, right hemisphere 143.9
1847 Female, age 91, left hemisphere 142.7
1841 Female, age 85, right hemisphere 140.2
Subiculum
nTPM: 196.6
2042 Male, age 76, both hemispheres 240.2
1901 Male, age 80, both hemispheres 209.7
1977 Female, age 85, both hemispheres 192.1
2619 Male, age 74, both hemispheres 191.8
2438 Female, age 94, left hemisphere 175.6
2729 Female, age 91, right hemisphere 169.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 204.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 204.0
Samples: 197

Max nTPM: 887.0
Min nTPM: 46.8
Std nTPM: 121.5
Median nTPM: 174.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 887.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 691.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 648.9
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 559.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 544.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 526.8
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 473.4
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 465.1
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 431.7
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 418.5
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 412.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 233.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 233.5
FF:10153-102I9 76 years, female 343.5
FF:10169-103B7 60 years, female 123.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 33.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 33.8
Samples: 4

Max nTPM: 48.1
Min nTPM: 6.9
Sample A Female 44.7
Sample B Female 35.5
Sample C Male 48.1
Sample D Male 6.9
Entorhinal cortex
nTPM: 13.3
Samples: 4

Max nTPM: 21.8
Min nTPM: 8.8
Sample A Female 11.9
Sample B Female 21.8
Sample C Male 10.7
Sample D Male 8.8
Subiculum
nTPM: 16.5
Samples: 4

Max nTPM: 23.1
Min nTPM: 12.7
Sample A Female 15.7
Sample B Female 23.1
Sample C Male 12.7
Sample D Male 14.3
Ventral hippocampus
nTPM: 20.9
Samples: 4

Max nTPM: 23.0
Min nTPM: 16.1
Sample A Female 21.6
Sample B Female 16.1
Sample C Male 22.9
Sample D Male 23.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 26.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 16.3
Samples: 4

Max nTPM: 23.1
Min nTPM: 11.5
Sample A Male 23.1
Sample B Male 16.2
Sample C Female 14.4
Sample D Female 11.5
Hippocampal formation
nTPM: 26.1
Samples: 4

Max nTPM: 33.7
Min nTPM: 21.5
Sample A Male 21.5
Sample B Male 24.1
Sample C Female 33.7
Sample D Female 25.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
638709 Antisense, RP_040831_02_C07, Mouse strain C57BL/6J (56 days, male) 0.0

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The Human Protein Atlas

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