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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:59.3 nTPM
HPA:59.3 nTPM
GTEx:57.9 nTPM
FANTOM5:120.3 Scaled Tags Per Million
Mouse:72.4 nTPM
Allen mouse:14.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004189Antibody CAB026457
Glial cells Not detectedLow
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 59.3
Sample id Sample description nTPM
Hippocampus
nTPM: 56.9
1898 Male, age 80, left hemisphere 63.3
1855 Male, age 76, left hemisphere 59.3
2529 Female, age 94, left hemisphere 55.8
2148 Female, age 91, left hemisphere 55.2
2621 Female, age 67, right hemisphere 54.6
1911 Female, age 85, right hemisphere 53.4
Dentate gyrus
nTPM: 55.7
2010 Male, age 76, both hemispheres 66.6
2530 Female, age 94, left hemisphere 59.4
2246 Female, age 85, both hemispheres 54.2
1927 Female, age 91, both hemispheres 52.7
2528 Male, age 74, both hemispheres 51.8
2531 Female, age 67, both hemispheres 49.5
Entorhinal gyrus
nTPM: 50.4
2686 Male, age 75, right hemisphere 52.4
2764 Male, age 80, right hemisphere 52.0
1938 Female, age 85, left hemisphere 50.5
2613 Female, age 94, left hemisphere 50.1
2117 Female, age 91, right hemisphere 49.5
1787 Male, age 76, left hemisphere 48.2
Hippocampus, CA1
nTPM: 57.1
2749 Male, age 80, left hemisphere 70.2
1873 Female, age 85, both hemispheres 56.9
2082 Female, age 91, right hemisphere 53.7
2527 Male, age 74, both hemispheres 53.1
2045 Male, age 76, both hemispheres 51.6
Hippocampus, CA2
nTPM: 56.6
1963 Male, age 80, left hemisphere 74.9
1940 Female, age 85, left hemisphere 56.5
2249 Male, age 74, both hemispheres 56.2
2113 Female, age 91, right hemisphere 54.7
1892 Male, age 76, both hemispheres 50.6
2437 Female, age 94, left hemisphere 46.4
Hippocampus, CA3
nTPM: 59.3
2436 Male, age 74, both hemispheres 86.0
2137 Male, age 80, left hemisphere 62.7
1891 Female, age 85, both hemispheres 54.6
1867 Male, age 76, both hemispheres 52.4
2620 Female, age 94, left hemisphere 50.4
2861 Female, age 67, both hemispheres 49.8
Parahippocampal cortex
nTPM: 51.7
2018 Male, age 76, both hemispheres 60.5
1850 Male, age 80, both hemispheres 57.5
2532 Female, age 72, left hemisphere 54.0
2692 Male, age 74, both hemispheres 52.7
1933 Female, age 85, both hemispheres 51.0
2622 Female, age 67, right hemisphere 50.6
2245 Female, age 91, both hemispheres 49.6
1990 Female, age 91, right hemisphere 49.5
2693 Female, age 94, both hemispheres 46.8
2250 Female, age 67, right hemisphere 44.6
Perirhinal gyrus
nTPM: 53.3
1847 Female, age 91, left hemisphere 59.3
2521 Female, age 94, right hemisphere 54.8
1794 Male, age 80, right hemisphere 54.7
1841 Female, age 85, right hemisphere 51.9
2848 Male, age 76, right hemisphere 45.8
Subiculum
nTPM: 53.0
2042 Male, age 76, both hemispheres 55.8
2438 Female, age 94, left hemisphere 53.5
1977 Female, age 85, both hemispheres 53.2
2729 Female, age 91, right hemisphere 53.1
2619 Male, age 74, both hemispheres 52.2
1901 Male, age 80, both hemispheres 50.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 57.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 57.9
Samples: 197

Max nTPM: 89.2
Min nTPM: 35.9
Std nTPM: 9.6
Median nTPM: 57.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 89.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 84.5
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 83.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 81.4
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 81.0
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 79.6
GTEX-QVJO-0011-R1A-SM-2S1QI 60-69 years, female 78.3
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 77.3
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 76.1
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 75.6
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 75.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 120.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 120.3
FF:10169-103B7 60 years, female 121.3
FF:10153-102I9 76 years, female 119.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 72.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 72.4
Samples: 4

Max nTPM: 75.8
Min nTPM: 70.9
Sample A Male 71.0
Sample B Male 70.9
Sample C Female 71.9
Sample D Female 75.8
Hippocampal formation
nTPM: 68.1
Samples: 4

Max nTPM: 72.9
Min nTPM: 60.7
Sample A Male 60.7
Sample B Male 67.1
Sample C Female 72.9
Sample D Female 71.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.3
74819232 Antisense, RP_060315_02_B08, Mouse strain C57BL/6J (56 days, male) 16.0
77932809 Antisense, RP_070320_02_C02, Mouse strain C57BL/6J (56 days, male) 12.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.