ABOUTMENU
HELP
NEWS
RAP1A
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:42.9 nTPM
HPA:42.9 nTPM
GTEx:57.1 nTPM
FANTOM5:53.0 Scaled Tags Per Million
Pig:8.7 nTPM
Mouse:63.9 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 42.9
Sample id Sample description nTPM
Hippocampus
nTPM: 42.8
1898 Male, age 80, left hemisphere 45.9
1911 Female, age 85, right hemisphere 44.0
1855 Male, age 76, left hemisphere 43.8
2529 Female, age 94, left hemisphere 43.1
2621 Female, age 67, right hemisphere 41.5
2148 Female, age 91, left hemisphere 38.7
Dentate gyrus
nTPM: 41.5
2530 Female, age 94, left hemisphere 46.0
2010 Male, age 76, both hemispheres 43.0
2528 Male, age 74, both hemispheres 41.0
1927 Female, age 91, both hemispheres 40.4
2246 Female, age 85, both hemispheres 40.3
2531 Female, age 67, both hemispheres 38.6
Entorhinal gyrus
nTPM: 39.8
2117 Female, age 91, right hemisphere 46.0
1938 Female, age 85, left hemisphere 41.4
1787 Male, age 76, left hemisphere 40.1
2686 Male, age 75, right hemisphere 39.5
2764 Male, age 80, right hemisphere 36.7
2613 Female, age 94, left hemisphere 34.9
Hippocampus, CA1
nTPM: 40.7
1873 Female, age 85, both hemispheres 42.3
2045 Male, age 76, both hemispheres 40.9
2527 Male, age 74, both hemispheres 40.9
2749 Male, age 80, left hemisphere 39.8
2082 Female, age 91, right hemisphere 39.4
Hippocampus, CA2
nTPM: 42.4
1940 Female, age 85, left hemisphere 43.5
1963 Male, age 80, left hemisphere 43.3
1892 Male, age 76, both hemispheres 43.2
2249 Male, age 74, both hemispheres 42.9
2437 Female, age 94, left hemisphere 41.4
2113 Female, age 91, right hemisphere 40.3
Hippocampus, CA3
nTPM: 40.1
1891 Female, age 85, both hemispheres 47.0
1867 Male, age 76, both hemispheres 46.3
2137 Male, age 80, left hemisphere 38.5
2436 Male, age 74, both hemispheres 38.1
2861 Female, age 67, both hemispheres 37.5
2620 Female, age 94, left hemisphere 33.4
Parahippocampal cortex
nTPM: 40.3
2018 Male, age 76, both hemispheres 44.4
1850 Male, age 80, both hemispheres 42.6
2250 Female, age 67, right hemisphere 42.0
1990 Female, age 91, right hemisphere 41.1
2693 Female, age 94, both hemispheres 40.7
2532 Female, age 72, left hemisphere 40.2
2692 Male, age 74, both hemispheres 39.5
1933 Female, age 85, both hemispheres 39.4
2245 Female, age 91, both hemispheres 38.7
2622 Female, age 67, right hemisphere 34.5
Perirhinal gyrus
nTPM: 39.9
2848 Male, age 76, right hemisphere 41.2
1794 Male, age 80, right hemisphere 40.0
1841 Female, age 85, right hemisphere 40.0
2521 Female, age 94, right hemisphere 40.0
1847 Female, age 91, left hemisphere 38.5
Subiculum
nTPM: 42.9
1901 Male, age 80, both hemispheres 47.0
2042 Male, age 76, both hemispheres 46.9
2438 Female, age 94, left hemisphere 42.9
2729 Female, age 91, right hemisphere 42.6
1977 Female, age 85, both hemispheres 41.3
2619 Male, age 74, both hemispheres 36.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 57.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 57.1
Samples: 197

Max nTPM: 128.9
Min nTPM: 27.7
Std nTPM: 20.1
Median nTPM: 51.9
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 128.9
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 121.3
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 114.2
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 109.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 106.9
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 104.9
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 100.6
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 99.2
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 98.2
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 96.9
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 95.1
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 53.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.0
FF:10153-102I9 76 years, female 60.0
FF:10169-103B7 60 years, female 46.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.7
Samples: 4

Max nTPM: 10.3
Min nTPM: 7.1
Sample A Female 9.3
Sample B Female 8.0
Sample C Male 10.3
Sample D Male 7.1
Entorhinal cortex
nTPM: 7.2
Samples: 4

Max nTPM: 8.2
Min nTPM: 6.5
Sample A Female 6.5
Sample B Female 8.2
Sample C Male 6.9
Sample D Male 7.0
Subiculum
nTPM: 7.0
Samples: 4

Max nTPM: 7.4
Min nTPM: 6.5
Sample A Female 6.7
Sample B Female 7.4
Sample C Male 6.5
Sample D Male 7.3
Ventral hippocampus
nTPM: 7.3
Samples: 4

Max nTPM: 8.0
Min nTPM: 6.1
Sample A Female 7.6
Sample B Female 7.6
Sample C Male 6.1
Sample D Male 8.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 63.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 46.1
Samples: 4

Max nTPM: 54.5
Min nTPM: 35.4
Sample A Male 54.5
Sample B Male 44.8
Sample C Female 49.6
Sample D Female 35.4
Hippocampal formation
nTPM: 63.9
Samples: 4

Max nTPM: 71.3
Min nTPM: 56.6
Sample A Male 56.6
Sample B Male 66.0
Sample C Female 71.3
Sample D Female 61.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
75831752 Antisense, RP_060601_02_D01, Mouse strain C57BL/6J (56 days, male) 1.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.