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SCAMP3
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:5.0 nTPM
HPA:5.0 nTPM
GTEx:33.3 nTPM
FANTOM5:73.3 Scaled Tags Per Million
Pig:40.9 nTPM
Mouse:45.0 nTPM
Allen mouse:1.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 5.0
Sample id Sample description nTPM
Hippocampus
nTPM: 4.3
2621 Female, age 67, right hemisphere 6.2
1911 Female, age 85, right hemisphere 5.9
2529 Female, age 94, left hemisphere 4.4
2148 Female, age 91, left hemisphere 4.0
1898 Male, age 80, left hemisphere 3.5
1855 Male, age 76, left hemisphere 2.0
Dentate gyrus
nTPM: 4.3
2530 Female, age 94, left hemisphere 5.4
1927 Female, age 91, both hemispheres 4.3
2246 Female, age 85, both hemispheres 4.3
2531 Female, age 67, both hemispheres 4.3
2528 Male, age 74, both hemispheres 3.8
2010 Male, age 76, both hemispheres 3.7
Entorhinal gyrus
nTPM: 3.8
1787 Male, age 76, left hemisphere 5.9
2613 Female, age 94, left hemisphere 4.8
2764 Male, age 80, right hemisphere 3.9
2117 Female, age 91, right hemisphere 3.4
1938 Female, age 85, left hemisphere 3.0
2686 Male, age 75, right hemisphere 1.9
Hippocampus, CA1
nTPM: 4.2
2749 Male, age 80, left hemisphere 5.6
2082 Female, age 91, right hemisphere 4.4
2045 Male, age 76, both hemispheres 4.1
1873 Female, age 85, both hemispheres 3.5
2527 Male, age 74, both hemispheres 3.5
Hippocampus, CA2
nTPM: 4.3
1892 Male, age 76, both hemispheres 5.7
2249 Male, age 74, both hemispheres 5.2
1963 Male, age 80, left hemisphere 4.4
2437 Female, age 94, left hemisphere 3.7
1940 Female, age 85, left hemisphere 3.6
2113 Female, age 91, right hemisphere 3.2
Hippocampus, CA3
nTPM: 4.4
2436 Male, age 74, both hemispheres 6.1
1867 Male, age 76, both hemispheres 5.4
2620 Female, age 94, left hemisphere 5.0
2137 Male, age 80, left hemisphere 3.8
1891 Female, age 85, both hemispheres 3.2
2861 Female, age 67, both hemispheres 3.2
Parahippocampal cortex
nTPM: 3.9
2245 Female, age 91, both hemispheres 5.3
2622 Female, age 67, right hemisphere 5.3
2018 Male, age 76, both hemispheres 4.6
1990 Female, age 91, right hemisphere 4.5
1933 Female, age 85, both hemispheres 4.0
2532 Female, age 72, left hemisphere 3.7
1850 Male, age 80, both hemispheres 3.4
2693 Female, age 94, both hemispheres 3.3
2250 Female, age 67, right hemisphere 2.6
2692 Male, age 74, both hemispheres 2.1
Perirhinal gyrus
nTPM: 3.8
1794 Male, age 80, right hemisphere 5.6
2521 Female, age 94, right hemisphere 4.4
1847 Female, age 91, left hemisphere 3.4
1841 Female, age 85, right hemisphere 2.8
2848 Male, age 76, right hemisphere 2.8
Subiculum
nTPM: 5.0
2438 Female, age 94, left hemisphere 6.4
1901 Male, age 80, both hemispheres 5.9
2619 Male, age 74, both hemispheres 5.5
2729 Female, age 91, right hemisphere 5.5
1977 Female, age 85, both hemispheres 3.4
2042 Male, age 76, both hemispheres 3.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 33.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 33.3
Samples: 197

Max nTPM: 58.5
Min nTPM: 16.7
Std nTPM: 7.8
Median nTPM: 32.7
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 58.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 54.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 54.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 54.4
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 52.3
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 51.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 51.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 50.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 48.5
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 48.3
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 48.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 73.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 73.3
FF:10169-103B7 60 years, female 74.2
FF:10153-102I9 76 years, female 72.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 40.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 40.9
Samples: 4

Max nTPM: 55.8
Min nTPM: 28.2
Sample A Female 55.8
Sample B Female 38.2
Sample C Male 41.5
Sample D Male 28.2
Entorhinal cortex
nTPM: 35.2
Samples: 4

Max nTPM: 38.9
Min nTPM: 30.5
Sample A Female 38.9
Sample B Female 33.9
Sample C Male 37.5
Sample D Male 30.5
Subiculum
nTPM: 36.5
Samples: 4

Max nTPM: 48.7
Min nTPM: 32.3
Sample A Female 48.7
Sample B Female 32.3
Sample C Male 32.5
Sample D Male 32.3
Ventral hippocampus
nTPM: 40.1
Samples: 4

Max nTPM: 50.2
Min nTPM: 27.5
Sample A Female 41.9
Sample B Female 27.5
Sample C Male 50.2
Sample D Male 40.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 45.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 41.5
Samples: 4

Max nTPM: 44.5
Min nTPM: 37.7
Sample A Male 41.7
Sample B Male 37.7
Sample C Female 42.2
Sample D Female 44.5
Hippocampal formation
nTPM: 45.0
Samples: 4

Max nTPM: 51.6
Min nTPM: 38.9
Sample A Male 38.9
Sample B Male 41.9
Sample C Female 47.4
Sample D Female 51.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.9
75695653 Antisense, RP_060518_04_C04, Mouse strain C57BL/6J (56 days, male) 1.9

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The Human Protein Atlas

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