ABOUTMENU
HELP
NEWS
GNPAT
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:22.0 nTPM
HPA:22.0 nTPM
GTEx:20.1 nTPM
FANTOM5:74.1 Scaled Tags Per Million
Pig:14.6 nTPM
Mouse:36.3 nTPM
Allen mouse:8.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.0
Sample id Sample description nTPM
Hippocampus
nTPM: 21.6
1898 Male, age 80, left hemisphere 22.6
1855 Male, age 76, left hemisphere 22.3
2529 Female, age 94, left hemisphere 21.7
1911 Female, age 85, right hemisphere 21.6
2621 Female, age 67, right hemisphere 20.9
2148 Female, age 91, left hemisphere 20.5
Dentate gyrus
nTPM: 20.7
2010 Male, age 76, both hemispheres 22.7
1927 Female, age 91, both hemispheres 21.5
2530 Female, age 94, left hemisphere 21.1
2246 Female, age 85, both hemispheres 20.5
2528 Male, age 74, both hemispheres 20.3
2531 Female, age 67, both hemispheres 17.9
Entorhinal gyrus
nTPM: 20.9
1787 Male, age 76, left hemisphere 22.1
1938 Female, age 85, left hemisphere 22.1
2764 Male, age 80, right hemisphere 21.5
2117 Female, age 91, right hemisphere 21.1
2686 Male, age 75, right hemisphere 20.1
2613 Female, age 94, left hemisphere 18.8
Hippocampus, CA1
nTPM: 21.9
2749 Male, age 80, left hemisphere 24.6
1873 Female, age 85, both hemispheres 22.5
2527 Male, age 74, both hemispheres 21.5
2045 Male, age 76, both hemispheres 20.5
2082 Female, age 91, right hemisphere 20.5
Hippocampus, CA2
nTPM: 21.9
1963 Male, age 80, left hemisphere 23.5
1892 Male, age 76, both hemispheres 23.1
2437 Female, age 94, left hemisphere 21.9
2113 Female, age 91, right hemisphere 21.3
2249 Male, age 74, both hemispheres 21.0
1940 Female, age 85, left hemisphere 20.4
Hippocampus, CA3
nTPM: 21.4
2137 Male, age 80, left hemisphere 23.1
1867 Male, age 76, both hemispheres 22.2
2436 Male, age 74, both hemispheres 22.2
1891 Female, age 85, both hemispheres 21.9
2620 Female, age 94, left hemisphere 19.7
2861 Female, age 67, both hemispheres 19.5
Parahippocampal cortex
nTPM: 21.1
1850 Male, age 80, both hemispheres 23.1
1933 Female, age 85, both hemispheres 22.0
2018 Male, age 76, both hemispheres 22.0
1990 Female, age 91, right hemisphere 21.2
2250 Female, age 67, right hemisphere 20.9
2245 Female, age 91, both hemispheres 20.8
2692 Male, age 74, both hemispheres 20.6
2532 Female, age 72, left hemisphere 20.2
2622 Female, age 67, right hemisphere 20.2
2693 Female, age 94, both hemispheres 20.0
Perirhinal gyrus
nTPM: 22.0
1847 Female, age 91, left hemisphere 23.5
1794 Male, age 80, right hemisphere 22.8
1841 Female, age 85, right hemisphere 22.2
2848 Male, age 76, right hemisphere 21.2
2521 Female, age 94, right hemisphere 20.3
Subiculum
nTPM: 22.0
2438 Female, age 94, left hemisphere 25.0
1901 Male, age 80, both hemispheres 22.6
1977 Female, age 85, both hemispheres 21.8
2042 Male, age 76, both hemispheres 21.2
2619 Male, age 74, both hemispheres 20.9
2729 Female, age 91, right hemisphere 20.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.1
Samples: 197

Max nTPM: 29.8
Min nTPM: 11.5
Std nTPM: 2.6
Median nTPM: 20.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 29.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 27.1
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 26.6
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 26.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 26.3
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 25.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 25.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 25.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 25.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 24.9
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 24.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 74.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 74.1
FF:10169-103B7 60 years, female 82.6
FF:10153-102I9 76 years, female 65.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.6
Samples: 4

Max nTPM: 18.0
Min nTPM: 12.1
Sample A Female 18.0
Sample B Female 14.4
Sample C Male 13.7
Sample D Male 12.1
Entorhinal cortex
nTPM: 12.4
Samples: 4

Max nTPM: 14.0
Min nTPM: 10.4
Sample A Female 12.2
Sample B Female 14.0
Sample C Male 12.9
Sample D Male 10.4
Subiculum
nTPM: 12.7
Samples: 4

Max nTPM: 15.1
Min nTPM: 11.7
Sample A Female 15.1
Sample B Female 12.2
Sample C Male 11.9
Sample D Male 11.7
Ventral hippocampus
nTPM: 12.9
Samples: 4

Max nTPM: 15.8
Min nTPM: 11.1
Sample A Female 12.6
Sample B Female 11.1
Sample C Male 11.9
Sample D Male 15.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 36.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 31.7
Samples: 4

Max nTPM: 33.5
Min nTPM: 30.3
Sample A Male 30.3
Sample B Male 32.4
Sample C Female 33.5
Sample D Female 30.6
Hippocampal formation
nTPM: 36.2
Samples: 4

Max nTPM: 37.2
Min nTPM: 34.0
Sample A Male 36.6
Sample B Male 34.0
Sample C Female 37.1
Sample D Female 37.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.4
68562982 Antisense, RP_050120_02_H04, Mouse strain C57BL/6J (56 days, male) 8.4

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.