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PADI2
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Not detected
RNA expressioni
Consensus:82.2 nTPM
HPA:82.2 nTPM
GTEx:73.5 nTPM
FANTOM5:161.3 Scaled Tags Per Million
Pig:79.5 nTPM
Mouse:17.7 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047735
Glial cells High
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 82.2
Sample id Sample description nTPM
Hippocampus
nTPM: 82.2
1855 Male, age 76, left hemisphere 104.1
1898 Male, age 80, left hemisphere 89.8
2529 Female, age 94, left hemisphere 79.4
2148 Female, age 91, left hemisphere 77.9
1911 Female, age 85, right hemisphere 77.0
2621 Female, age 67, right hemisphere 64.9
Dentate gyrus
nTPM: 73.5
2530 Female, age 94, left hemisphere 94.1
2010 Male, age 76, both hemispheres 88.8
2528 Male, age 74, both hemispheres 86.9
2246 Female, age 85, both hemispheres 66.7
2531 Female, age 67, both hemispheres 53.8
1927 Female, age 91, both hemispheres 50.8
Entorhinal gyrus
nTPM: 70.7
2117 Female, age 91, right hemisphere 123.4
1787 Male, age 76, left hemisphere 78.9
2764 Male, age 80, right hemisphere 65.8
2686 Male, age 75, right hemisphere 59.5
1938 Female, age 85, left hemisphere 55.8
2613 Female, age 94, left hemisphere 40.9
Hippocampus, CA1
nTPM: 65.7
2527 Male, age 74, both hemispheres 70.1
2045 Male, age 76, both hemispheres 69.6
1873 Female, age 85, both hemispheres 68.5
2082 Female, age 91, right hemisphere 62.6
2749 Male, age 80, left hemisphere 57.7
Hippocampus, CA2
nTPM: 71.7
1963 Male, age 80, left hemisphere 78.5
1940 Female, age 85, left hemisphere 77.3
2249 Male, age 74, both hemispheres 76.4
1892 Male, age 76, both hemispheres 66.5
2437 Female, age 94, left hemisphere 65.7
2113 Female, age 91, right hemisphere 65.6
Hippocampus, CA3
nTPM: 62.3
1891 Female, age 85, both hemispheres 76.0
1867 Male, age 76, both hemispheres 75.8
2620 Female, age 94, left hemisphere 65.0
2436 Male, age 74, both hemispheres 53.5
2137 Male, age 80, left hemisphere 53.1
2861 Female, age 67, both hemispheres 50.6
Parahippocampal cortex
nTPM: 60.0
2018 Male, age 76, both hemispheres 83.0
2692 Male, age 74, both hemispheres 65.1
2532 Female, age 72, left hemisphere 62.4
2245 Female, age 91, both hemispheres 61.2
1850 Male, age 80, both hemispheres 58.3
1990 Female, age 91, right hemisphere 57.9
1933 Female, age 85, both hemispheres 56.7
2693 Female, age 94, both hemispheres 53.4
2250 Female, age 67, right hemisphere 51.5
2622 Female, age 67, right hemisphere 50.7
Perirhinal gyrus
nTPM: 51.3
2848 Male, age 76, right hemisphere 63.8
1794 Male, age 80, right hemisphere 60.1
1841 Female, age 85, right hemisphere 45.2
2521 Female, age 94, right hemisphere 44.4
1847 Female, age 91, left hemisphere 42.8
Subiculum
nTPM: 81.4
2042 Male, age 76, both hemispheres 115.8
2729 Female, age 91, right hemisphere 102.8
1901 Male, age 80, both hemispheres 82.9
1977 Female, age 85, both hemispheres 66.2
2619 Male, age 74, both hemispheres 65.4
2438 Female, age 94, left hemisphere 55.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 73.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 73.5
Samples: 197

Max nTPM: 208.3
Min nTPM: 14.9
Std nTPM: 34.1
Median nTPM: 68.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 208.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 199.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 186.9
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 168.3
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 158.7
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 157.2
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 156.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 150.1
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 147.9
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 144.4
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 143.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 161.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 161.3
FF:10153-102I9 76 years, female 166.7
FF:10169-103B7 60 years, female 155.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 79.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 79.5
Samples: 4

Max nTPM: 117.7
Min nTPM: 28.4
Sample A Female 116.0
Sample B Female 55.9
Sample C Male 117.7
Sample D Male 28.4
Entorhinal cortex
nTPM: 33.7
Samples: 4

Max nTPM: 39.6
Min nTPM: 27.8
Sample A Female 34.9
Sample B Female 39.6
Sample C Male 27.8
Sample D Male 32.6
Subiculum
nTPM: 39.0
Samples: 4

Max nTPM: 49.3
Min nTPM: 32.7
Sample A Female 49.3
Sample B Female 40.2
Sample C Male 32.7
Sample D Male 33.9
Ventral hippocampus
nTPM: 57.7
Samples: 4

Max nTPM: 70.5
Min nTPM: 30.4
Sample A Female 70.5
Sample B Female 30.4
Sample C Male 61.3
Sample D Male 68.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.3
Samples: 4

Max nTPM: 15.0
Min nTPM: 10.8
Sample A Male 15.0
Sample B Male 11.4
Sample C Female 11.8
Sample D Female 10.8
Hippocampal formation
nTPM: 17.7
Samples: 4

Max nTPM: 23.4
Min nTPM: 13.4
Sample A Male 13.4
Sample B Male 16.7
Sample C Female 23.4
Sample D Female 17.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
69013438 Antisense, RP_050309_02_D07, Mouse strain C57BL/6J (56 days, male) 1.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
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