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PRDX1
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Low
RNA expressioni
Consensus:613.0 nTPM
HPA:613.0 nTPM
GTEx:361.0 nTPM
FANTOM5:421.9 Scaled Tags Per Million
Pig:57.8 nTPM
Mouse:298.5 nTPM
Allen mouse:3.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007730Antibody CAB004682
Glial cells MediumMedium
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 613.0
Sample id Sample description nTPM
Hippocampus
nTPM: 610.0
1898 Male, age 80, left hemisphere 629.4
2529 Female, age 94, left hemisphere 628.3
1855 Male, age 76, left hemisphere 613.0
1911 Female, age 85, right hemisphere 602.2
2148 Female, age 91, left hemisphere 599.8
2621 Female, age 67, right hemisphere 587.2
Dentate gyrus
nTPM: 601.0
2528 Male, age 74, both hemispheres 653.8
2010 Male, age 76, both hemispheres 618.1
2246 Female, age 85, both hemispheres 592.7
2530 Female, age 94, left hemisphere 589.1
1927 Female, age 91, both hemispheres 586.8
2531 Female, age 67, both hemispheres 565.5
Entorhinal gyrus
nTPM: 591.4
2117 Female, age 91, right hemisphere 633.3
1938 Female, age 85, left hemisphere 604.6
1787 Male, age 76, left hemisphere 600.0
2764 Male, age 80, right hemisphere 597.4
2686 Male, age 75, right hemisphere 562.7
2613 Female, age 94, left hemisphere 550.1
Hippocampus, CA1
nTPM: 607.0
2527 Male, age 74, both hemispheres 636.3
1873 Female, age 85, both hemispheres 608.9
2082 Female, age 91, right hemisphere 606.4
2045 Male, age 76, both hemispheres 592.7
2749 Male, age 80, left hemisphere 590.8
Hippocampus, CA2
nTPM: 613.0
2249 Male, age 74, both hemispheres 676.3
2113 Female, age 91, right hemisphere 610.5
1963 Male, age 80, left hemisphere 607.5
1940 Female, age 85, left hemisphere 602.5
1892 Male, age 76, both hemispheres 593.5
2437 Female, age 94, left hemisphere 587.8
Hippocampus, CA3
nTPM: 594.1
2436 Male, age 74, both hemispheres 636.1
1891 Female, age 85, both hemispheres 612.1
1867 Male, age 76, both hemispheres 604.5
2137 Male, age 80, left hemisphere 578.5
2620 Female, age 94, left hemisphere 575.3
2861 Female, age 67, both hemispheres 558.1
Parahippocampal cortex
nTPM: 593.9
2250 Female, age 67, right hemisphere 617.4
2018 Male, age 76, both hemispheres 610.1
1990 Female, age 91, right hemisphere 604.9
1933 Female, age 85, both hemispheres 604.2
1850 Male, age 80, both hemispheres 600.9
2245 Female, age 91, both hemispheres 589.0
2692 Male, age 74, both hemispheres 588.9
2532 Female, age 72, left hemisphere 578.5
2693 Female, age 94, both hemispheres 573.4
2622 Female, age 67, right hemisphere 571.4
Perirhinal gyrus
nTPM: 602.8
1847 Female, age 91, left hemisphere 615.3
2521 Female, age 94, right hemisphere 605.7
1794 Male, age 80, right hemisphere 605.3
1841 Female, age 85, right hemisphere 605.3
2848 Male, age 76, right hemisphere 582.2
Subiculum
nTPM: 611.4
2729 Female, age 91, right hemisphere 633.0
2619 Male, age 74, both hemispheres 628.6
1977 Female, age 85, both hemispheres 613.1
2042 Male, age 76, both hemispheres 612.7
1901 Male, age 80, both hemispheres 598.0
2438 Female, age 94, left hemisphere 583.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 361.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 361.0
Samples: 197

Max nTPM: 591.0
Min nTPM: 236.4
Std nTPM: 69.7
Median nTPM: 355.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 591.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 573.9
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 542.1
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 532.2
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 514.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 512.6
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 508.2
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 508.0
GTEX-14PQA-0011-R1b-SM-6EU1G 50-59 years, female 502.9
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 482.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 480.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 421.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 421.9
FF:10153-102I9 76 years, female 423.2
FF:10169-103B7 60 years, female 420.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 57.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 57.9
Samples: 4

Max nTPM: 85.0
Min nTPM: 44.9
Sample A Female 85.0
Sample B Female 52.2
Sample C Male 49.3
Sample D Male 44.9
Entorhinal cortex
nTPM: 35.5
Samples: 4

Max nTPM: 47.0
Min nTPM: 28.8
Sample A Female 31.5
Sample B Female 47.0
Sample C Male 34.5
Sample D Male 28.8
Subiculum
nTPM: 35.0
Samples: 4

Max nTPM: 44.4
Min nTPM: 26.5
Sample A Female 44.4
Sample B Female 34.8
Sample C Male 26.5
Sample D Male 34.3
Ventral hippocampus
nTPM: 45.0
Samples: 4

Max nTPM: 49.8
Min nTPM: 39.0
Sample A Female 49.8
Sample B Female 39.0
Sample C Male 42.6
Sample D Male 48.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 298.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 286.8
Samples: 4

Max nTPM: 301.3
Min nTPM: 261.4
Sample A Male 301.3
Sample B Male 292.9
Sample C Female 291.4
Sample D Female 261.4
Hippocampal formation
nTPM: 298.5
Samples: 4

Max nTPM: 333.3
Min nTPM: 269.0
Sample A Male 333.3
Sample B Male 269.0
Sample C Female 281.2
Sample D Female 310.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.7
836 Antisense, RP_Baylor_102943, Mouse strain C57BL/6J (56 days, male) 6.6
837 Antisense, RP_Baylor_102943, Mouse strain C57BL/6J (56 days, male) 1.5
70795736 Antisense, RP_050712_01_H04, Mouse strain C57BL/6J (56 days, male) 0.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.