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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:36.9 nTPM
HPA:36.9 nTPM
GTEx:41.4 nTPM
FANTOM5:99.1 Scaled Tags Per Million
Pig:20.5 nTPM
Mouse:60.9 nTPM
Allen mouse:4.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018265
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 36.9
Sample id Sample description nTPM
Hippocampus
nTPM: 36.9
2529 Female, age 94, left hemisphere 38.0
1898 Male, age 80, left hemisphere 37.3
2621 Female, age 67, right hemisphere 37.3
1855 Male, age 76, left hemisphere 36.9
1911 Female, age 85, right hemisphere 36.9
2148 Female, age 91, left hemisphere 35.1
Dentate gyrus
nTPM: 36.3
2010 Male, age 76, both hemispheres 38.2
2530 Female, age 94, left hemisphere 38.1
1927 Female, age 91, both hemispheres 35.9
2531 Female, age 67, both hemispheres 35.6
2246 Female, age 85, both hemispheres 35.4
2528 Male, age 74, both hemispheres 34.7
Entorhinal gyrus
nTPM: 35.8
1787 Male, age 76, left hemisphere 36.7
1938 Female, age 85, left hemisphere 36.5
2117 Female, age 91, right hemisphere 36.1
2686 Male, age 75, right hemisphere 35.9
2764 Male, age 80, right hemisphere 35.1
2613 Female, age 94, left hemisphere 34.6
Hippocampus, CA1
nTPM: 36.8
1873 Female, age 85, both hemispheres 37.6
2045 Male, age 76, both hemispheres 37.4
2749 Male, age 80, left hemisphere 37.4
2527 Male, age 74, both hemispheres 37.0
2082 Female, age 91, right hemisphere 34.8
Hippocampus, CA2
nTPM: 36.5
1892 Male, age 76, both hemispheres 38.3
1940 Female, age 85, left hemisphere 37.4
2437 Female, age 94, left hemisphere 36.4
1963 Male, age 80, left hemisphere 36.1
2249 Male, age 74, both hemispheres 35.5
2113 Female, age 91, right hemisphere 35.3
Hippocampus, CA3
nTPM: 36.0
1891 Female, age 85, both hemispheres 37.7
1867 Male, age 76, both hemispheres 37.4
2137 Male, age 80, left hemisphere 37.0
2436 Male, age 74, both hemispheres 36.0
2861 Female, age 67, both hemispheres 34.8
2620 Female, age 94, left hemisphere 33.4
Parahippocampal cortex
nTPM: 35.9
1850 Male, age 80, both hemispheres 37.5
2018 Male, age 76, both hemispheres 37.4
2245 Female, age 91, both hemispheres 36.3
2250 Female, age 67, right hemisphere 36.2
2692 Male, age 74, both hemispheres 36.2
1933 Female, age 85, both hemispheres 35.9
1990 Female, age 91, right hemisphere 35.9
2532 Female, age 72, left hemisphere 34.9
2622 Female, age 67, right hemisphere 34.9
2693 Female, age 94, both hemispheres 33.8
Perirhinal gyrus
nTPM: 36.2
1847 Female, age 91, left hemisphere 36.9
1841 Female, age 85, right hemisphere 36.8
1794 Male, age 80, right hemisphere 36.3
2848 Male, age 76, right hemisphere 35.9
2521 Female, age 94, right hemisphere 35.0
Subiculum
nTPM: 36.1
2042 Male, age 76, both hemispheres 37.9
1901 Male, age 80, both hemispheres 37.1
2729 Female, age 91, right hemisphere 35.6
1977 Female, age 85, both hemispheres 35.5
2438 Female, age 94, left hemisphere 35.5
2619 Male, age 74, both hemispheres 35.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 41.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 41.4
Samples: 197

Max nTPM: 106.4
Min nTPM: 25.4
Std nTPM: 9.1
Median nTPM: 39.6
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 106.4
GTEX-NPJ7-0011-R1a-SM-3GACT 60-69 years, female 83.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 70.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 62.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 60.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 59.8
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 58.8
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 58.3
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 57.8
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 56.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 56.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 99.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 99.1
FF:10153-102I9 76 years, female 109.4
FF:10169-103B7 60 years, female 88.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 20.5
Samples: 4

Max nTPM: 25.3
Min nTPM: 14.6
Sample A Female 25.3
Sample B Female 19.3
Sample C Male 22.8
Sample D Male 14.6
Entorhinal cortex
nTPM: 18.9
Samples: 4

Max nTPM: 20.2
Min nTPM: 17.6
Sample A Female 20.2
Sample B Female 19.6
Sample C Male 18.2
Sample D Male 17.6
Subiculum
nTPM: 19.5
Samples: 4

Max nTPM: 24.9
Min nTPM: 15.8
Sample A Female 24.9
Sample B Female 17.0
Sample C Male 15.8
Sample D Male 20.1
Ventral hippocampus
nTPM: 17.7
Samples: 4

Max nTPM: 20.1
Min nTPM: 16.0
Sample A Female 18.4
Sample B Female 16.0
Sample C Male 16.2
Sample D Male 20.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 60.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 58.1
Samples: 4

Max nTPM: 61.3
Min nTPM: 49.9
Sample A Male 60.3
Sample B Male 61.0
Sample C Female 61.3
Sample D Female 49.9
Hippocampal formation
nTPM: 60.9
Samples: 4

Max nTPM: 61.9
Min nTPM: 59.6
Sample A Male 61.9
Sample B Male 59.6
Sample C Female 60.9
Sample D Female 61.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.5
69549608 Antisense, RP_050203_02_A07, Mouse strain C57BL/6J (56 days, male) 4.5

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