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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:130.9 nTPM
HPA:130.9 nTPM
GTEx:106.0 nTPM
FANTOM5:65.9 Scaled Tags Per Million
Pig:15.9 nTPM
Mouse:90.1 nTPM
Allen mouse:0.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026763Antibody HPA028488
Glial cells Not detectedLow
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 130.9
Sample id Sample description nTPM
Hippocampus
nTPM: 128.2
1898 Male, age 80, left hemisphere 133.5
2529 Female, age 94, left hemisphere 129.7
1911 Female, age 85, right hemisphere 128.3
2148 Female, age 91, left hemisphere 126.4
2621 Female, age 67, right hemisphere 126.3
1855 Male, age 76, left hemisphere 124.7
Dentate gyrus
nTPM: 125.4
2530 Female, age 94, left hemisphere 130.3
2010 Male, age 76, both hemispheres 127.9
2528 Male, age 74, both hemispheres 124.5
1927 Female, age 91, both hemispheres 124.3
2531 Female, age 67, both hemispheres 123.3
2246 Female, age 85, both hemispheres 121.8
Entorhinal gyrus
nTPM: 130.1
2117 Female, age 91, right hemisphere 138.1
2764 Male, age 80, right hemisphere 134.4
1938 Female, age 85, left hemisphere 130.2
1787 Male, age 76, left hemisphere 126.5
2613 Female, age 94, left hemisphere 126.5
2686 Male, age 75, right hemisphere 125.0
Hippocampus, CA1
nTPM: 125.0
1873 Female, age 85, both hemispheres 127.0
2749 Male, age 80, left hemisphere 126.3
2045 Male, age 76, both hemispheres 125.5
2527 Male, age 74, both hemispheres 125.1
2082 Female, age 91, right hemisphere 120.9
Hippocampus, CA2
nTPM: 127.2
2249 Male, age 74, both hemispheres 132.8
1963 Male, age 80, left hemisphere 130.0
2437 Female, age 94, left hemisphere 127.4
1940 Female, age 85, left hemisphere 126.5
1892 Male, age 76, both hemispheres 125.3
2113 Female, age 91, right hemisphere 121.0
Hippocampus, CA3
nTPM: 124.5
1891 Female, age 85, both hemispheres 131.4
1867 Male, age 76, both hemispheres 129.7
2436 Male, age 74, both hemispheres 122.9
2620 Female, age 94, left hemisphere 122.8
2861 Female, age 67, both hemispheres 120.3
2137 Male, age 80, left hemisphere 120.0
Parahippocampal cortex
nTPM: 124.8
1990 Female, age 91, right hemisphere 129.7
2018 Male, age 76, both hemispheres 129.3
1850 Male, age 80, both hemispheres 126.9
2532 Female, age 72, left hemisphere 126.8
1933 Female, age 85, both hemispheres 126.3
2692 Male, age 74, both hemispheres 123.8
2245 Female, age 91, both hemispheres 123.2
2250 Female, age 67, right hemisphere 120.7
2693 Female, age 94, both hemispheres 120.7
2622 Female, age 67, right hemisphere 120.4
Perirhinal gyrus
nTPM: 124.6
1847 Female, age 91, left hemisphere 126.2
1794 Male, age 80, right hemisphere 124.8
1841 Female, age 85, right hemisphere 124.4
2521 Female, age 94, right hemisphere 124.1
2848 Male, age 76, right hemisphere 123.7
Subiculum
nTPM: 130.9
1901 Male, age 80, both hemispheres 135.4
2042 Male, age 76, both hemispheres 132.4
1977 Female, age 85, both hemispheres 132.1
2729 Female, age 91, right hemisphere 129.5
2438 Female, age 94, left hemisphere 128.7
2619 Male, age 74, both hemispheres 127.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 106.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 106.0
Samples: 197

Max nTPM: 312.3
Min nTPM: 35.5
Std nTPM: 38.9
Median nTPM: 100.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 312.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 268.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 252.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 192.0
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 184.2
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 181.7
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 180.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 177.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 172.7
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 171.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 169.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 65.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 65.9
FF:10169-103B7 60 years, female 70.1
FF:10153-102I9 76 years, female 61.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 15.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 15.9
Samples: 4

Max nTPM: 21.7
Min nTPM: 9.4
Sample A Female 21.7
Sample B Female 14.0
Sample C Male 18.4
Sample D Male 9.4
Entorhinal cortex
nTPM: 13.0
Samples: 4

Max nTPM: 15.1
Min nTPM: 9.7
Sample A Female 12.8
Sample B Female 15.1
Sample C Male 14.3
Sample D Male 9.7
Subiculum
nTPM: 13.7
Samples: 4

Max nTPM: 16.7
Min nTPM: 12.0
Sample A Female 16.7
Sample B Female 13.8
Sample C Male 12.4
Sample D Male 12.0
Ventral hippocampus
nTPM: 15.5
Samples: 4

Max nTPM: 17.2
Min nTPM: 13.9
Sample A Female 16.8
Sample B Female 13.9
Sample C Male 17.2
Sample D Male 14.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 90.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 90.1
Samples: 4

Max nTPM: 97.7
Min nTPM: 86.2
Sample A Male 97.7
Sample B Male 89.4
Sample C Female 87.2
Sample D Female 86.2
Hippocampal formation
nTPM: 82.8
Samples: 4

Max nTPM: 87.1
Min nTPM: 76.4
Sample A Male 87.1
Sample B Male 76.4
Sample C Female 85.3
Sample D Female 82.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.2
71763972 Antisense, RP_050921_02_H09, Mouse strain C57BL/6J (56 days, male) 0.2
74272919 Antisense, RP_050921_02_H09, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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