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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:18.3 nTPM
HPA:18.3 nTPM
GTEx:36.8 nTPM
FANTOM5:11.9 Scaled Tags Per Million
Pig:16.1 nTPM
Mouse:32.5 nTPM
Allen mouse:10.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017254Antibody CAB016231Antibody CAB022105
Glial cells LowNot detectedLow
Neuronal cells MediumNot detectedMedium






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.3
Sample id Sample description nTPM
Hippocampus
nTPM: 18.0
2148 Female, age 91, left hemisphere 19.9
2529 Female, age 94, left hemisphere 19.2
2621 Female, age 67, right hemisphere 18.0
1898 Male, age 80, left hemisphere 17.6
1911 Female, age 85, right hemisphere 17.5
1855 Male, age 76, left hemisphere 15.9
Dentate gyrus
nTPM: 17.3
2531 Female, age 67, both hemispheres 19.7
2530 Female, age 94, left hemisphere 18.3
1927 Female, age 91, both hemispheres 18.1
2528 Male, age 74, both hemispheres 17.1
2010 Male, age 76, both hemispheres 16.9
2246 Female, age 85, both hemispheres 13.9
Entorhinal gyrus
nTPM: 17.1
2686 Male, age 75, right hemisphere 18.2
2613 Female, age 94, left hemisphere 17.9
2764 Male, age 80, right hemisphere 17.9
2117 Female, age 91, right hemisphere 16.8
1787 Male, age 76, left hemisphere 16.6
1938 Female, age 85, left hemisphere 15.1
Hippocampus, CA1
nTPM: 16.5
2749 Male, age 80, left hemisphere 17.9
2082 Female, age 91, right hemisphere 17.6
2527 Male, age 74, both hemispheres 16.0
1873 Female, age 85, both hemispheres 15.8
2045 Male, age 76, both hemispheres 15.3
Hippocampus, CA2
nTPM: 17.1
1963 Male, age 80, left hemisphere 20.2
2113 Female, age 91, right hemisphere 18.7
2437 Female, age 94, left hemisphere 16.5
1940 Female, age 85, left hemisphere 16.0
1892 Male, age 76, both hemispheres 15.9
2249 Male, age 74, both hemispheres 15.6
Hippocampus, CA3
nTPM: 18.3
2861 Female, age 67, both hemispheres 23.7
2620 Female, age 94, left hemisphere 22.0
2436 Male, age 74, both hemispheres 18.4
2137 Male, age 80, left hemisphere 17.0
1867 Male, age 76, both hemispheres 14.9
1891 Female, age 85, both hemispheres 13.7
Parahippocampal cortex
nTPM: 15.8
2622 Female, age 67, right hemisphere 19.7
2245 Female, age 91, both hemispheres 18.3
2250 Female, age 67, right hemisphere 16.9
1933 Female, age 85, both hemispheres 16.1
2018 Male, age 76, both hemispheres 16.0
1990 Female, age 91, right hemisphere 15.7
2692 Male, age 74, both hemispheres 15.1
2532 Female, age 72, left hemisphere 14.0
2693 Female, age 94, both hemispheres 13.6
1850 Male, age 80, both hemispheres 12.4
Perirhinal gyrus
nTPM: 14.9
1794 Male, age 80, right hemisphere 15.9
1847 Female, age 91, left hemisphere 15.7
2848 Male, age 76, right hemisphere 14.8
1841 Female, age 85, right hemisphere 14.6
2521 Female, age 94, right hemisphere 13.6
Subiculum
nTPM: 15.4
2729 Female, age 91, right hemisphere 17.5
2619 Male, age 74, both hemispheres 16.4
1977 Female, age 85, both hemispheres 15.2
2042 Male, age 76, both hemispheres 14.8
2438 Female, age 94, left hemisphere 14.8
1901 Male, age 80, both hemispheres 13.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 36.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 36.8
Samples: 197

Max nTPM: 85.4
Min nTPM: 11.2
Std nTPM: 10.5
Median nTPM: 35.1
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 85.4
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 67.2
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 67.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 66.1
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 65.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 62.5
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 59.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 58.7
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 57.2
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 56.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 56.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.9
FF:10153-102I9 76 years, female 14.5
FF:10169-103B7 60 years, female 9.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 16.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 14.2
Samples: 4

Max nTPM: 17.1
Min nTPM: 11.1
Sample A Female 17.1
Sample B Female 14.2
Sample C Male 14.4
Sample D Male 11.1
Entorhinal cortex
nTPM: 16.1
Samples: 4

Max nTPM: 17.8
Min nTPM: 13.9
Sample A Female 17.0
Sample B Female 15.7
Sample C Male 17.8
Sample D Male 13.9
Subiculum
nTPM: 15.6
Samples: 4

Max nTPM: 19.9
Min nTPM: 12.9
Sample A Female 19.9
Sample B Female 14.6
Sample C Male 14.8
Sample D Male 12.9
Ventral hippocampus
nTPM: 15.3
Samples: 4

Max nTPM: 19.9
Min nTPM: 12.1
Sample A Female 15.1
Sample B Female 12.1
Sample C Male 19.9
Sample D Male 14.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 32.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 32.5
Samples: 4

Max nTPM: 38.3
Min nTPM: 26.3
Sample A Male 34.2
Sample B Male 31.3
Sample C Female 26.3
Sample D Female 38.3
Hippocampal formation
nTPM: 29.2
Samples: 4

Max nTPM: 33.4
Min nTPM: 22.7
Sample A Male 22.7
Sample B Male 33.4
Sample C Female 30.9
Sample D Female 29.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.2
69887349 Antisense, RP_050512_03_E07, Mouse strain C57BL/6J (56 days, male) 10.2

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The Human Protein Atlas

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