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CAMSAP2
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
RNA expressioni
Consensus:20.6 nTPM
HPA:20.6 nTPM
GTEx:19.2 nTPM
FANTOM5:4.3 Scaled Tags Per Million
Pig:47.9 nTPM
Mouse:70.5 nTPM
Allen mouse:9.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA026304Antibody HPA026511Antibody HPA027302
Glial cells MediumMediumHigh
Neuronal cells HighMediumMedium







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.6
Sample id Sample description nTPM
Hippocampus
nTPM: 14.1
1898 Male, age 80, left hemisphere 20.6
2621 Female, age 67, right hemisphere 14.5
2529 Female, age 94, left hemisphere 13.7
2148 Female, age 91, left hemisphere 13.4
1855 Male, age 76, left hemisphere 12.2
1911 Female, age 85, right hemisphere 10.3
Dentate gyrus
nTPM: 13.4
1927 Female, age 91, both hemispheres 19.8
2246 Female, age 85, both hemispheres 15.1
2531 Female, age 67, both hemispheres 14.1
2528 Male, age 74, both hemispheres 12.4
2010 Male, age 76, both hemispheres 10.6
2530 Female, age 94, left hemisphere 8.6
Entorhinal gyrus
nTPM: 12.4
1938 Female, age 85, left hemisphere 17.4
2764 Male, age 80, right hemisphere 12.8
2686 Male, age 75, right hemisphere 11.7
1787 Male, age 76, left hemisphere 11.4
2613 Female, age 94, left hemisphere 11.1
2117 Female, age 91, right hemisphere 10.0
Hippocampus, CA1
nTPM: 18.6
2749 Male, age 80, left hemisphere 35.1
2527 Male, age 74, both hemispheres 16.5
1873 Female, age 85, both hemispheres 16.4
2045 Male, age 76, both hemispheres 15.7
2082 Female, age 91, right hemisphere 9.4
Hippocampus, CA2
nTPM: 12.8
1892 Male, age 76, both hemispheres 18.2
1963 Male, age 80, left hemisphere 17.7
2437 Female, age 94, left hemisphere 10.9
2113 Female, age 91, right hemisphere 10.1
1940 Female, age 85, left hemisphere 9.9
2249 Male, age 74, both hemispheres 9.9
Hippocampus, CA3
nTPM: 17.1
2137 Male, age 80, left hemisphere 32.3
2620 Female, age 94, left hemisphere 19.0
1867 Male, age 76, both hemispheres 16.7
1891 Female, age 85, both hemispheres 13.5
2861 Female, age 67, both hemispheres 11.3
2436 Male, age 74, both hemispheres 10.0
Parahippocampal cortex
nTPM: 14.4
1850 Male, age 80, both hemispheres 20.6
1933 Female, age 85, both hemispheres 16.0
2693 Female, age 94, both hemispheres 15.9
2245 Female, age 91, both hemispheres 15.8
2250 Female, age 67, right hemisphere 15.1
1990 Female, age 91, right hemisphere 14.8
2532 Female, age 72, left hemisphere 12.6
2622 Female, age 67, right hemisphere 12.4
2692 Male, age 74, both hemispheres 11.6
2018 Male, age 76, both hemispheres 8.9
Perirhinal gyrus
nTPM: 20.6
1841 Female, age 85, right hemisphere 23.0
1847 Female, age 91, left hemisphere 23.0
1794 Male, age 80, right hemisphere 22.2
2521 Female, age 94, right hemisphere 18.0
2848 Male, age 76, right hemisphere 17.1
Subiculum
nTPM: 14.0
1901 Male, age 80, both hemispheres 19.0
2438 Female, age 94, left hemisphere 16.8
1977 Female, age 85, both hemispheres 16.0
2619 Male, age 74, both hemispheres 11.8
2729 Female, age 91, right hemisphere 10.5
2042 Male, age 76, both hemispheres 9.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.2
Samples: 197

Max nTPM: 39.3
Min nTPM: 10.5
Std nTPM: 4.6
Median nTPM: 19.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 39.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 34.0
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 31.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 31.2
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 30.0
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 29.7
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 28.8
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 28.7
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 27.3
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 26.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 26.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 4.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 4.3
FF:10169-103B7 60 years, female 5.2
FF:10153-102I9 76 years, female 3.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 47.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 38.5
Samples: 4

Max nTPM: 43.4
Min nTPM: 31.6
Sample A Female 41.8
Sample B Female 43.4
Sample C Male 37.2
Sample D Male 31.6
Entorhinal cortex
nTPM: 47.9
Samples: 4

Max nTPM: 50.1
Min nTPM: 46.8
Sample A Female 50.1
Sample B Female 46.8
Sample C Male 48.0
Sample D Male 46.8
Subiculum
nTPM: 38.1
Samples: 4

Max nTPM: 45.9
Min nTPM: 33.6
Sample A Female 45.9
Sample B Female 34.4
Sample C Male 38.6
Sample D Male 33.6
Ventral hippocampus
nTPM: 40.4
Samples: 4

Max nTPM: 48.0
Min nTPM: 33.4
Sample A Female 36.8
Sample B Female 33.4
Sample C Male 48.0
Sample D Male 43.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 70.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 68.0
Samples: 4

Max nTPM: 82.4
Min nTPM: 62.0
Sample A Male 64.2
Sample B Male 62.0
Sample C Female 63.2
Sample D Female 82.4
Hippocampal formation
nTPM: 70.5
Samples: 4

Max nTPM: 87.0
Min nTPM: 58.1
Sample A Male 60.5
Sample B Male 76.3
Sample C Female 87.0
Sample D Female 58.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.7
70218283 Antisense, RP_050519_03_F12, Mouse strain C57BL/6J (56 days, male) 10.3
70723181 Antisense, RP_050630_04_C12, Mouse strain C57BL/6J (56 days, male) 9.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.