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HMGN3
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Not detected
RNA expressioni
Consensus:132.9 nTPM
HPA:132.9 nTPM
GTEx:119.4 nTPM
FANTOM5:156.9 Scaled Tags Per Million
Pig:19.0 nTPM
Mouse:87.0 nTPM
Allen mouse:3.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027971Antibody HPA063572Antibody CAB018370
Glial cells HighMediumHigh
Neuronal cells Not detectedNot detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 132.9
Sample id Sample description nTPM
Hippocampus
nTPM: 132.9
2529 Female, age 94, left hemisphere 136.9
2621 Female, age 67, right hemisphere 133.0
1911 Female, age 85, right hemisphere 132.3
2148 Female, age 91, left hemisphere 132.3
1855 Male, age 76, left hemisphere 131.6
1898 Male, age 80, left hemisphere 131.0
Dentate gyrus
nTPM: 130.7
2246 Female, age 85, both hemispheres 135.7
1927 Female, age 91, both hemispheres 132.5
2010 Male, age 76, both hemispheres 130.7
2531 Female, age 67, both hemispheres 128.8
2530 Female, age 94, left hemisphere 128.6
2528 Male, age 74, both hemispheres 127.7
Entorhinal gyrus
nTPM: 130.1
1938 Female, age 85, left hemisphere 135.1
2117 Female, age 91, right hemisphere 134.8
1787 Male, age 76, left hemisphere 132.5
2686 Male, age 75, right hemisphere 127.4
2764 Male, age 80, right hemisphere 125.9
2613 Female, age 94, left hemisphere 124.8
Hippocampus, CA1
nTPM: 130.4
2527 Male, age 74, both hemispheres 133.6
1873 Female, age 85, both hemispheres 132.7
2045 Male, age 76, both hemispheres 132.7
2082 Female, age 91, right hemisphere 128.1
2749 Male, age 80, left hemisphere 124.7
Hippocampus, CA2
nTPM: 131.7
1940 Female, age 85, left hemisphere 140.9
2249 Male, age 74, both hemispheres 130.6
1963 Male, age 80, left hemisphere 130.3
2437 Female, age 94, left hemisphere 129.8
1892 Male, age 76, both hemispheres 129.2
2113 Female, age 91, right hemisphere 129.1
Hippocampus, CA3
nTPM: 130.3
2436 Male, age 74, both hemispheres 137.1
1891 Female, age 85, both hemispheres 136.0
2620 Female, age 94, left hemisphere 128.2
1867 Male, age 76, both hemispheres 127.9
2861 Female, age 67, both hemispheres 127.5
2137 Male, age 80, left hemisphere 125.1
Parahippocampal cortex
nTPM: 132.7
1933 Female, age 85, both hemispheres 135.4
2692 Male, age 74, both hemispheres 134.9
2250 Female, age 67, right hemisphere 134.4
2245 Female, age 91, both hemispheres 134.0
2622 Female, age 67, right hemisphere 132.7
2693 Female, age 94, both hemispheres 132.6
2532 Female, age 72, left hemisphere 132.5
1990 Female, age 91, right hemisphere 131.1
1850 Male, age 80, both hemispheres 130.4
2018 Male, age 76, both hemispheres 129.2
Perirhinal gyrus
nTPM: 130.1
2521 Female, age 94, right hemisphere 133.0
2848 Male, age 76, right hemisphere 132.8
1841 Female, age 85, right hemisphere 130.1
1794 Male, age 80, right hemisphere 129.7
1847 Female, age 91, left hemisphere 125.2
Subiculum
nTPM: 132.2
2438 Female, age 94, left hemisphere 134.5
2619 Male, age 74, both hemispheres 133.9
1977 Female, age 85, both hemispheres 132.7
2042 Male, age 76, both hemispheres 131.2
2729 Female, age 91, right hemisphere 131.0
1901 Male, age 80, both hemispheres 130.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 119.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 119.4
Samples: 197

Max nTPM: 229.1
Min nTPM: 58.2
Std nTPM: 24.7
Median nTPM: 118.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 229.1
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 191.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 190.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 183.9
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 183.3
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 177.7
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 177.3
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 175.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 170.3
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 170.1
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 167.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 156.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 156.9
FF:10153-102I9 76 years, female 201.9
FF:10169-103B7 60 years, female 111.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 19.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 19.0
Samples: 4

Max nTPM: 21.3
Min nTPM: 15.7
Sample A Female 21.1
Sample B Female 18.0
Sample C Male 15.7
Sample D Male 21.3
Entorhinal cortex
nTPM: 16.6
Samples: 4

Max nTPM: 17.8
Min nTPM: 13.5
Sample A Female 17.2
Sample B Female 17.8
Sample C Male 17.7
Sample D Male 13.5
Subiculum
nTPM: 17.5
Samples: 4

Max nTPM: 23.3
Min nTPM: 13.9
Sample A Female 23.3
Sample B Female 15.7
Sample C Male 13.9
Sample D Male 17.0
Ventral hippocampus
nTPM: 16.7
Samples: 4

Max nTPM: 17.7
Min nTPM: 15.0
Sample A Female 17.7
Sample B Female 16.7
Sample C Male 17.2
Sample D Male 15.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 87.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 78.0
Samples: 4

Max nTPM: 85.7
Min nTPM: 67.4
Sample A Male 77.4
Sample B Male 85.7
Sample C Female 81.3
Sample D Female 67.4
Hippocampal formation
nTPM: 87.0
Samples: 4

Max nTPM: 91.1
Min nTPM: 81.1
Sample A Male 91.1
Sample B Male 89.5
Sample C Female 81.1
Sample D Female 86.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.4
69059927 Antisense, RP_050317_04_E08, Mouse strain C57BL/6J (56 days, male) 3.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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