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ANKRD13C
BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:6.2 nTPM
HPA:6.2 nTPM
GTEx:7.3 nTPM
FANTOM5:45.9 Scaled Tags Per Million
Pig:16.6 nTPM
Mouse:40.2 nTPM
Allen mouse:4.3 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 6.2
Sample id Sample description nTPM
Caudate nucleus
nTPM: 4.5
1781 Male, age 74, unknown 5.1
2846 Female, age 79, unknown 4.9
2481 Female, age 94, left hemisphere 4.8
1857 Female, age 85, left hemisphere 4.7
2288 Male, age 75, left hemisphere 4.5
2290 Female, age 72, unknown 4.5
1854 Male, age 80, left hemisphere 4.3
2289 Male, age 61, right hemisphere 3.2
Claustrum
nTPM: 5.0
2491 Male, age 75, both hemispheres 5.7
2392 Female, age 94, both hemispheres 5.6
1956 Male, age 74, unknown 5.5
2196 Female, age 79, unknown 5.1
2568 Male, age 61, both hemispheres 5.0
2292 Female, age 85, both hemispheres 4.9
2284 Female, age 91, both hemispheres 4.7
2198 Male, age 80, both hemispheres 4.5
2645 Female, age 72, unknown 4.2
Globus pallidus, externus
nTPM: 3.7
1996 Male, age 80, right hemisphere 4.9
2395 Male, age 75, both hemispheres 4.2
2772 Female, age 79, unknown 3.8
2567 Female, age 72, unknown 3.0
2646 Male, age 61, right hemisphere 2.8
Globus pallidus, internus
nTPM: 4.9
2287 Male, age 75, right hemisphere 7.4
2778 Female, age 91, both hemispheres 5.2
2111 Female, age 85, right hemisphere 4.9
2483 Female, age 94, right hemisphere 4.6
2037 Male, age 80, right hemisphere 4.1
2566 Female, age 72, unknown 4.1
1818 Male, age 74, unknown 3.7
Nucleus accumbens
nTPM: 4.9
2824 Male, age 61, right hemisphere 6.2
1856 Female, age 91, right hemisphere 5.4
1783 Male, age 74, unknown 5.3
2698 Female, age 72, unknown 5.2
1806 Female, age 85, left hemisphere 5.1
2286 Male, age 75, left hemisphere 5.0
2391 Female, age 94, left hemisphere 3.9
2732 Male, age 80, right hemisphere 3.3
Nucleus basalis of Meynert
nTPM: 3.7
2484 Female, age 94, left hemisphere 4.1
2821 Male, age 75, both hemispheres 4.1
2393 Male, age 80, right hemisphere 3.7
2569 Male, age 61, both hemispheres 3.0
Nucleus of the diagonal band
nTPM: 5.8
2029 Male, age 61, right hemisphere 6.4
2775 Male, age 80, right hemisphere 6.3
2195 Female, age 85, both hemispheres 5.9
1812 Female, age 91, both hemispheres 5.8
1979 Male, age 74, unknown 4.8
Olfactory tubercle
nTPM: 6.2
2487 Female, age 94, left hemisphere 7.1
1998 Female, age 91, both hemispheres 6.1
1846 Male, age 80, right hemisphere 6.0
2856 Male, age 75, right hemisphere 5.6
Putamen
nTPM: 4.1
1838 Male, age 80, right hemisphere 4.8
1937 Female, age 91, right hemisphere 4.6
2482 Female, age 94, left hemisphere 4.5
2647 Male, age 75, left hemisphere 4.3
1829 Male, age 74, unknown 4.0
2466 Female, age 79, unknown 3.7
2489 Female, age 72, unknown 2.4
Septal nuclei
nTPM: 4.9
2031 Female, age 72, unknown 7.3
1960 Male, age 74, unknown 5.4
2629 Female, age 94, right hemisphere 5.1
2009 Female, age 91, both hemispheres 4.6
2059 Female, age 85, both hemispheres 4.3
2199 Male, age 80, right hemisphere 3.6
2394 Male, age 61, left hemisphere 3.5

BASAL GANGLIA - GTEx RNA-seqi
Max average nTPM 7.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 6.8
Samples: 246

Max nTPM: 12.8
Min nTPM: 4.1
Std nTPM: 1.2
Median nTPM: 6.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 12.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 12.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 10.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 10.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 10.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 10.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 9.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 9.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 9.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 9.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 8.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 7.3
Samples: 246

Max nTPM: 13.0
Min nTPM: 4.6
Std nTPM: 1.2
Median nTPM: 7.3
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 13.0
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 10.9
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 10.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 10.5
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 10.1
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 9.8
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 9.6
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 9.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 9.4
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 9.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 9.3
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Brain - Putamen (basal ganglia)
Average nTPM: 6.7
Samples: 205

Max nTPM: 12.1
Min nTPM: 4.6
Std nTPM: 1.1
Median nTPM: 6.6
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 12.1
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 11.2
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 9.7
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 9.7
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 9.3
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 9.1
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 9.0
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 9.0
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 9.0
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 8.6
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 8.5
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BASAL GANGLIA - FANTOM5 CAGEi
Max Scaled Tags Per Million 45.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 40.6
FF:10164-103B2 76 years, female 40.6
Globus pallidus
Scaled Tags Per Million: 33.2
FF:10161-103A8 76 years, female 38.1
FF:10175-103C4 60 years, female 28.4
Nucleus accumbens
Scaled Tags Per Million: 43.7
FF:10037-101F1 23-56 years, mixed 43.6
Putamen
Scaled Tags Per Million: 45.9
FF:10176-103C5 60 years, female 45.9

BASAL GANGLIA - Pig RNA-seqi
Average nTPM 16.6
Pig sample Sample description nTPM
Caudate
nTPM: 14.0
Samples: 4

Max nTPM: 14.2
Min nTPM: 13.8
Sample A Female 13.8
Sample B Female 14.1
Sample C Male 14.2
Sample D Male 14.0
Putamen
nTPM: 16.6
Samples: 4

Max nTPM: 20.6
Min nTPM: 14.9
Sample A Female 14.9
Sample B Female 15.4
Sample C Male 20.6
Sample D Male 15.3
Septum
nTPM: 16.7
Samples: 4

Max nTPM: 18.1
Min nTPM: 15.3
Sample A Female 18.1
Sample B Female 15.9
Sample C Male 17.3
Sample D Male 15.3
Ventral pallidum
nTPM: 15.7
Samples: 4

Max nTPM: 16.5
Min nTPM: 14.6
Sample A Female 16.0
Sample B Female 16.5
Sample C Male 15.6
Sample D Male 14.6

BASAL GANGLIA - Mouse RNA-seqi
Average nTPM 40.2
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 40.2
Samples: 4

Max nTPM: 44.5
Min nTPM: 37.2
Sample A Male 37.6
Sample B Male 37.2
Sample C Female 44.5
Sample D Female 41.6
Septum
nTPM: 36.2
Samples: 4

Max nTPM: 39.1
Min nTPM: 34.6
Sample A Male 34.6
Sample B Male 36.2
Sample C Female 34.9
Sample D Female 39.1
Ventral forebrain
nTPM: 38.6
Samples: 4

Max nTPM: 39.9
Min nTPM: 36.5
Sample A Male 38.6
Sample B Male 39.2
Sample C Female 36.5
Sample D Female 39.9

BASAL GANGLIA - Allen Mouse ISHi
Max Expression energy 4.3
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 4.3
70813185 Antisense, RP_050712_03_D03, Mouse strain C57BL/6J (56 days, male) 4.4
70786652 Antisense, RP_050706_02_H12, Mouse strain C57BL/6J (56 days, male) 4.3
Pallidum
Expression energy: 3.3
70813185 Antisense, RP_050712_03_D03, Mouse strain C57BL/6J (56 days, male) 3.5
70786652 Antisense, RP_050706_02_H12, Mouse strain C57BL/6J (56 days, male) 3.0

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The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.