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ABCG2
MIDBRAIN - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:31.3 nTPM
HPA:31.3 nTPM
GTEx:24.9 nTPM
FANTOM5:26.0 Scaled Tags Per Million
Pig:36.1 nTPM
Mouse:0.2 nTPM
Allen mouse:0.1 Expression energy

MIDBRAIN - HPA Brain RNA-seq
Max nTPM 31.3
Sample id Sample description nTPM
Cuneiform nucleus
nTPM: 26.8
2666 Male, age 74, left hemisphere 33.0
2219 Male, age 76, both hemispheres 32.3
2019 Male, age 18, unknown 30.6
1870 Female, age 42, unknown 27.4
1833 Male, age 53, unknown 27.1
1830 Male, age 51, unknown 27.0
2828 Female, age 72, unknown 26.4
2411 Female, age 72, unknown 26.1
1827 Male, age 72, unknown 21.6
2586 Male, age 75, left hemisphere 16.4
Dorsal raphe nucleus
nTPM: 25.9
2750 Male, age 76, both hemispheres 29.1
1828 Male, age 53, unknown 27.8
2016 Female, age 72, unknown 24.8
2047 Male, age 72, unknown 24.3
2298 Female, age 72, unknown 23.4
Inferior colliculus
nTPM: 27.1
2097 Female, age 72, unknown 30.5
1890 Male, age 53, unknown 29.4
1848 Female, age 42, unknown 26.4
2849 Male, age 72, unknown 22.1
Median raphe nucleus
nTPM: 27.5
2220 Male, age 76, midline 27.5
Pedunculopontine tegmental nucleus
nTPM: 25.8
2334 Male, age 80, both hemispheres 29.1
1921 Female, age 85, both hemispheres 25.1
2338 Male, age 61, both hemispheres 23.3
Periaquaductal grey, anterior
nTPM: 24.6
2502 Female, age 75, unknown 27.8
1947 Male, age 18, unknown 25.0
1795 Male, age 51, unknown 20.9
Periaquaductal grey, dorsal
nTPM: 22.1
2464 Female, age 72, unknown 25.2
1831 Male, age 72, unknown 22.3
2850 Male, age 76, both hemispheres 21.9
1840 Male, age 53, unknown 18.8
Periaquaductal grey, lateral
nTPM: 21.6
2053 Male, age 18, unknown 22.4
2272 Male, age 74, both hemispheres 22.1
2140 Male, age 76, both hemispheres 20.2
Pretectal area
nTPM: 23.6
1817 Female, age 42, unknown 28.9
2007 Male, age 72, unknown 28.2
1815 Male, age 53, unknown 26.0
1944 Female, age 72, unknown 24.4
2316 Male, age 76, right hemisphere 24.4
2667 Female, age 75, unknown 24.3
1816 Male, age 51, unknown 23.8
2224 Female, age 72, unknown 22.5
2825 Male, age 18, unknown 21.7
2273 Male, age 74, both hemispheres 19.7
2407 Male, age 75, both hemispheres 16.0
Red nucleus
nTPM: 31.3
1954 Female, age 42, unknown 40.4
1821 Female, age 72, unknown 35.4
1904 Male, age 53, unknown 34.6
2769 Male, age 72, unknown 33.5
2227 Male, age 72, unknown 33.0
2588 Male, age 74, left hemisphere 32.4
2503 Female, age 72, unknown 32.0
1865 Male, age 51, unknown 31.3
2823 Male, age 76, right hemisphere 29.9
2785 Male, age 18, unknown 28.7
2725 Female, age 75, unknown 25.0
2584 Male, age 75, left hemisphere 19.4
Substantia nigra
nTPM: 28.1
2665 Male, age 74, both hemispheres 44.8
2241 Male, age 72, unknown 30.2
2409 Female, age 72, unknown 28.6
1851 Male, age 51, unknown 28.2
1916 Female, age 42, unknown 27.9
1889 Female, age 72, unknown 27.2
1941 Male, age 53, unknown 25.3
2590 Female, age 75, unknown 24.3
2699 Male, age 18, unknown 24.0
2583 Male, age 75, right hemisphere 20.4
Superior colliculus
nTPM: 23.1
2587 Male, age 74, left hemisphere 27.1
1895 Male, age 76, right hemisphere 26.9
2668 Female, age 75, unknown 24.9
2087 Female, age 72, unknown 24.8
1839 Male, age 51, unknown 23.4
1913 Female, age 42, unknown 22.9
2261 Male, age 18, unknown 22.7
1995 Male, age 72, unknown 22.0
1796 Male, age 53, unknown 20.5
2664 Male, age 75, both hemispheres 16.2
Ventral tegmental area
nTPM: 26.7
2218 Male, age 76, both hemispheres 28.6
2410 Female, age 72, unknown 28.3
2223 Female, age 72, unknown 27.3
1942 Male, age 51, unknown 26.2
1915 Female, age 42, unknown 24.9
2021 Male, age 53, unknown 24.7

MIDBRAIN - GTEx RNA-seqi
Average nTPM 24.9
GTEx sample id Sample description nTPM
Brain - Substantia nigra
Average nTPM: 24.9
Samples: 139

Max nTPM: 91.4
Min nTPM: 0.9
Std nTPM: 13.7
Median nTPM: 21.8
GTEX-1IL2U-0011-R2a-SM-ARU6V 60-69 years, male 91.4
GTEX-NPJ8-0011-R2a-SM-2TC6M 40-49 years, male 62.1
GTEX-14ASI-0011-R2b-SM-5YY9H 60-69 years, male 60.2
GTEX-1H23P-0011-R2a-SM-CKZP3 60-69 years, male 59.4
GTEX-14BIN-0011-R2a-SM-5S2RJ 50-59 years, female 55.2
GTEX-1J1OQ-0011-R2b-SM-ARU88 40-49 years, female 53.6
GTEX-11WQC-0011-R2a-SM-DO927 60-69 years, male 51.1
GTEX-1F75B-0011-R2a-SM-ARL8I 50-59 years, male 49.5
GTEX-17HG3-0011-R2a-SM-7MGVX 30-39 years, female 47.5
GTEX-1H3VE-0011-R2a-SM-CE6SA 40-49 years, male 46.8
GTEX-1C6VR-0011-R2a-SM-7RHGZ 60-69 years, male 45.1
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MIDBRAIN - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Substantia nigra
Scaled Tags Per Million: 26.0
FF:10158-103A5 76 years, female 26.0

MIDBRAIN - Pig RNA-seqi
Average nTPM 36.1
Pig sample Sample description nTPM
Midbrain
nTPM: 33.3
Samples: 4

Max nTPM: 37.1
Min nTPM: 31.5
Sample A Female 32.1
Sample B Female 31.5
Sample C Male 37.1
Sample D Male 32.5
Periaqueductal gray
nTPM: 26.6
Samples: 3

Max nTPM: 28.7
Min nTPM: 22.5
Sample B Female 28.6
Sample C Male 28.7
Sample D Male 22.5
Substantia nigra
nTPM: 36.1
Samples: 4

Max nTPM: 38.3
Min nTPM: 33.9
Sample A Female 33.9
Sample B Female 36.1
Sample C Male 35.9
Sample D Male 38.3
Superior colliculi
nTPM: 33.8
Samples: 4

Max nTPM: 40.7
Min nTPM: 22.3
Sample A Female 32.8
Sample B Female 22.3
Sample C Male 40.7
Sample D Male 39.3

MIDBRAIN - Mouse RNA-seqi
Average nTPM 0.2
Mouse sample Sample description nTPM
Midbrain
nTPM: 0.2
Samples: 4

Max nTPM: 0.4
Min nTPM: 0.0
Sample A Male 0.4
Sample B Male 0.3
Sample C Female 0.2
Sample D Female 0.0

MIDBRAIN - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Midbrain
Expression energy: 0.1
71808612 Antisense, RP_050926_02_G10, Mouse strain C57BL/6J (56 days, male) 0.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
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