ABOUTMENU
HELP
NEWS
ELL2
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:18.4 nTPM
HPA:18.4 nTPM
GTEx:18.1 nTPM
FANTOM5:24.6 Scaled Tags Per Million
Pig:18.8 nTPM
Mouse:12.9 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.4
Sample id Sample description nTPM
Hippocampus
nTPM: 16.9
1898 Male, age 80, left hemisphere 21.6
1855 Male, age 76, left hemisphere 20.9
1911 Female, age 85, right hemisphere 17.4
2621 Female, age 67, right hemisphere 15.4
2148 Female, age 91, left hemisphere 13.5
2529 Female, age 94, left hemisphere 12.3
Dentate gyrus
nTPM: 18.4
2010 Male, age 76, both hemispheres 29.3
2530 Female, age 94, left hemisphere 19.9
2246 Female, age 85, both hemispheres 19.0
1927 Female, age 91, both hemispheres 16.0
2528 Male, age 74, both hemispheres 14.9
2531 Female, age 67, both hemispheres 11.2
Entorhinal gyrus
nTPM: 16.2
2117 Female, age 91, right hemisphere 18.7
1938 Female, age 85, left hemisphere 18.4
1787 Male, age 76, left hemisphere 18.1
2764 Male, age 80, right hemisphere 17.6
2686 Male, age 75, right hemisphere 14.3
2613 Female, age 94, left hemisphere 10.1
Hippocampus, CA1
nTPM: 17.6
2045 Male, age 76, both hemispheres 26.5
1873 Female, age 85, both hemispheres 22.7
2749 Male, age 80, left hemisphere 15.5
2082 Female, age 91, right hemisphere 13.4
2527 Male, age 74, both hemispheres 9.9
Hippocampus, CA2
nTPM: 15.5
1963 Male, age 80, left hemisphere 24.1
1892 Male, age 76, both hemispheres 15.7
2249 Male, age 74, both hemispheres 15.0
2113 Female, age 91, right hemisphere 13.5
2437 Female, age 94, left hemisphere 12.4
1940 Female, age 85, left hemisphere 12.1
Hippocampus, CA3
nTPM: 12.5
1867 Male, age 76, both hemispheres 22.6
1891 Female, age 85, both hemispheres 22.1
2137 Male, age 80, left hemisphere 8.9
2436 Male, age 74, both hemispheres 7.9
2861 Female, age 67, both hemispheres 7.3
2620 Female, age 94, left hemisphere 6.3
Parahippocampal cortex
nTPM: 15.8
2018 Male, age 76, both hemispheres 24.9
2532 Female, age 72, left hemisphere 20.6
1850 Male, age 80, both hemispheres 20.5
1933 Female, age 85, both hemispheres 18.9
2692 Male, age 74, both hemispheres 16.1
1990 Female, age 91, right hemisphere 15.8
2693 Female, age 94, both hemispheres 14.1
2245 Female, age 91, both hemispheres 12.7
2250 Female, age 67, right hemisphere 8.2
2622 Female, age 67, right hemisphere 6.1
Perirhinal gyrus
nTPM: 17.4
1841 Female, age 85, right hemisphere 20.4
1794 Male, age 80, right hemisphere 20.0
2521 Female, age 94, right hemisphere 16.8
2848 Male, age 76, right hemisphere 15.1
1847 Female, age 91, left hemisphere 14.5
Subiculum
nTPM: 18.4
2042 Male, age 76, both hemispheres 27.0
1901 Male, age 80, both hemispheres 20.4
2729 Female, age 91, right hemisphere 17.4
1977 Female, age 85, both hemispheres 17.1
2438 Female, age 94, left hemisphere 16.8
2619 Male, age 74, both hemispheres 11.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.1
Samples: 197

Max nTPM: 82.7
Min nTPM: 6.3
Std nTPM: 10.1
Median nTPM: 15.1
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 82.7
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 62.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 57.2
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 51.7
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 50.2
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 49.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 45.2
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 42.2
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 39.4
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 38.4
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 32.9
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 24.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 24.6
FF:10169-103B7 60 years, female 32.4
FF:10153-102I9 76 years, female 16.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.6
Samples: 4

Max nTPM: 14.1
Min nTPM: 5.1
Sample A Female 13.5
Sample B Female 9.7
Sample C Male 14.1
Sample D Male 5.1
Entorhinal cortex
nTPM: 18.9
Samples: 4

Max nTPM: 21.8
Min nTPM: 15.2
Sample A Female 20.0
Sample B Female 21.8
Sample C Male 15.2
Sample D Male 18.4
Subiculum
nTPM: 10.0
Samples: 4

Max nTPM: 11.4
Min nTPM: 8.0
Sample A Female 10.3
Sample B Female 10.1
Sample C Male 8.0
Sample D Male 11.4
Ventral hippocampus
nTPM: 9.0
Samples: 4

Max nTPM: 11.1
Min nTPM: 6.6
Sample A Female 11.1
Sample B Female 6.6
Sample C Male 8.4
Sample D Male 9.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.9
Samples: 4

Max nTPM: 15.3
Min nTPM: 10.1
Sample A Male 15.3
Sample B Male 14.7
Sample C Female 11.3
Sample D Female 10.1
Hippocampal formation
nTPM: 11.8
Samples: 4

Max nTPM: 13.6
Min nTPM: 10.2
Sample A Male 11.0
Sample B Male 10.2
Sample C Female 12.5
Sample D Female 13.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
71213659 Antisense, RP_050816_04_D01, Mouse strain C57BL/6J (56 days, male) 1.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.