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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:4.6 nTPM
HPA:4.6 nTPM
GTEx:3.6 nTPM
FANTOM5:11.1 Scaled Tags Per Million
Pig:37.1 nTPM
Mouse:17.9 nTPM
Allen mouse:4.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001042Antibody HPA029543Antibody CAB023669Antibody CAB062562Antibody CAB067751Antibody CAB068229Antibody CAB068230Antibody CAB068231
Glial cells Not detectedNot detectedNot detectedNot detectedNot detectedNot detectedNot detectedNot detected
Neuronal cells HighLowLowMediumLowNot detectedNot detectedMedium

















HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 4.6
Sample id Sample description nTPM
Hippocampus
nTPM: 0.0
1855 Male, age 76, left hemisphere 0.0
1898 Male, age 80, left hemisphere 0.0
1911 Female, age 85, right hemisphere 0.0
2148 Female, age 91, left hemisphere 0.0
2529 Female, age 94, left hemisphere 0.0
2621 Female, age 67, right hemisphere 0.0
Dentate gyrus
nTPM: 0.0
1927 Female, age 91, both hemispheres 0.0
2010 Male, age 76, both hemispheres 0.0
2246 Female, age 85, both hemispheres 0.0
2528 Male, age 74, both hemispheres 0.0
2530 Female, age 94, left hemisphere 0.0
2531 Female, age 67, both hemispheres 0.0
Entorhinal gyrus
nTPM: 0.0
1787 Male, age 76, left hemisphere 0.0
1938 Female, age 85, left hemisphere 0.0
2117 Female, age 91, right hemisphere 0.0
2613 Female, age 94, left hemisphere 0.0
2686 Male, age 75, right hemisphere 0.0
2764 Male, age 80, right hemisphere 0.0
Hippocampus, CA1
nTPM: 0.0
1873 Female, age 85, both hemispheres 0.0
2045 Male, age 76, both hemispheres 0.0
2082 Female, age 91, right hemisphere 0.0
2527 Male, age 74, both hemispheres 0.0
2749 Male, age 80, left hemisphere 0.0
Hippocampus, CA2
nTPM: 0.0
1892 Male, age 76, both hemispheres 0.0
1940 Female, age 85, left hemisphere 0.0
1963 Male, age 80, left hemisphere 0.0
2113 Female, age 91, right hemisphere 0.0
2249 Male, age 74, both hemispheres 0.0
2437 Female, age 94, left hemisphere 0.0
Hippocampus, CA3
nTPM: 0.0
1867 Male, age 76, both hemispheres 0.0
1891 Female, age 85, both hemispheres 0.0
2137 Male, age 80, left hemisphere 0.0
2436 Male, age 74, both hemispheres 0.0
2620 Female, age 94, left hemisphere 0.0
2861 Female, age 67, both hemispheres 0.0
Parahippocampal cortex
nTPM: 0.9
2622 Female, age 67, right hemisphere 5.9
2532 Female, age 72, left hemisphere 3.7
1850 Male, age 80, both hemispheres 0.0
1933 Female, age 85, both hemispheres 0.0
1990 Female, age 91, right hemisphere 0.0
2018 Male, age 76, both hemispheres 0.0
2245 Female, age 91, both hemispheres 0.0
2250 Female, age 67, right hemisphere 0.0
2692 Male, age 74, both hemispheres 0.0
2693 Female, age 94, both hemispheres 0.0
Perirhinal gyrus
nTPM: 4.6
1841 Female, age 85, right hemisphere 10.6
2848 Male, age 76, right hemisphere 10.6
1794 Male, age 80, right hemisphere 2.0
1847 Female, age 91, left hemisphere 0.0
2521 Female, age 94, right hemisphere 0.0
Subiculum
nTPM: 0.0
1901 Male, age 80, both hemispheres 0.0
1977 Female, age 85, both hemispheres 0.0
2042 Male, age 76, both hemispheres 0.0
2438 Female, age 94, left hemisphere 0.0
2619 Male, age 74, both hemispheres 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 3.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 3.6
Samples: 197

Max nTPM: 16.9
Min nTPM: 0.7
Std nTPM: 2.7
Median nTPM: 2.9
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 16.9
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 16.3
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 16.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 14.1
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 12.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 12.2
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 11.6
GTEX-1ICLZ-0011-R1b-SM-A9SM3 60-69 years, male 11.6
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 10.4
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 9.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 9.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.1
FF:10153-102I9 76 years, female 15.0
FF:10169-103B7 60 years, female 7.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 37.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 8.2
Samples: 4

Max nTPM: 9.7
Min nTPM: 5.8
Sample A Female 9.7
Sample B Female 9.2
Sample C Male 8.1
Sample D Male 5.8
Entorhinal cortex
nTPM: 37.1
Samples: 4

Max nTPM: 40.2
Min nTPM: 31.8
Sample A Female 39.7
Sample B Female 36.6
Sample C Male 31.8
Sample D Male 40.2
Subiculum
nTPM: 12.6
Samples: 4

Max nTPM: 19.2
Min nTPM: 8.1
Sample A Female 19.2
Sample B Female 11.2
Sample C Male 8.1
Sample D Male 11.9
Ventral hippocampus
nTPM: 7.8
Samples: 4

Max nTPM: 18.9
Min nTPM: 2.4
Sample A Female 2.4
Sample B Female 4.9
Sample C Male 4.8
Sample D Male 18.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 17.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.9
Samples: 4

Max nTPM: 25.0
Min nTPM: 10.6
Sample A Male 19.1
Sample B Male 25.0
Sample C Female 10.6
Sample D Female 16.8
Hippocampal formation
nTPM: 4.6
Samples: 4

Max nTPM: 5.7
Min nTPM: 3.6
Sample A Male 5.7
Sample B Male 4.8
Sample C Female 3.6
Sample D Female 4.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.1
70593343 Antisense, RP_050407_04_A02, Mouse strain C57BL/6J (56 days, male) 4.9
73992708 Antisense, RP_051214_01_E02, Mouse strain C57BL/6J (56 days, male) 3.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.