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CTNNAL1
HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:23.0 nTPM
HPA:23.0 nTPM
GTEx:11.9 nTPM
FANTOM5:18.8 Scaled Tags Per Million
Mouse:8.1 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 23.0
Sample id Sample description nTPM
Hippocampus
nTPM: 19.1
2621 Female, age 67, right hemisphere 19.8
1898 Male, age 80, left hemisphere 19.7
2148 Female, age 91, left hemisphere 19.7
2529 Female, age 94, left hemisphere 18.9
1855 Male, age 76, left hemisphere 18.5
1911 Female, age 85, right hemisphere 18.2
Dentate gyrus
nTPM: 19.9
2531 Female, age 67, both hemispheres 22.1
2246 Female, age 85, both hemispheres 19.9
2528 Male, age 74, both hemispheres 19.9
1927 Female, age 91, both hemispheres 19.8
2010 Male, age 76, both hemispheres 19.7
2530 Female, age 94, left hemisphere 17.9
Entorhinal gyrus
nTPM: 19.9
2686 Male, age 75, right hemisphere 21.1
1938 Female, age 85, left hemisphere 20.6
2764 Male, age 80, right hemisphere 19.9
2117 Female, age 91, right hemisphere 19.5
1787 Male, age 76, left hemisphere 19.1
2613 Female, age 94, left hemisphere 19.1
Hippocampus, CA1
nTPM: 19.5
2082 Female, age 91, right hemisphere 21.1
2045 Male, age 76, both hemispheres 20.4
2527 Male, age 74, both hemispheres 19.5
1873 Female, age 85, both hemispheres 18.6
2749 Male, age 80, left hemisphere 18.0
Hippocampus, CA2
nTPM: 19.9
1940 Female, age 85, left hemisphere 21.7
1892 Male, age 76, both hemispheres 20.9
2113 Female, age 91, right hemisphere 20.5
2249 Male, age 74, both hemispheres 20.2
1963 Male, age 80, left hemisphere 18.3
2437 Female, age 94, left hemisphere 17.8
Hippocampus, CA3
nTPM: 20.4
2436 Male, age 74, both hemispheres 21.4
2861 Female, age 67, both hemispheres 21.4
2620 Female, age 94, left hemisphere 21.3
1867 Male, age 76, both hemispheres 20.6
1891 Female, age 85, both hemispheres 19.7
2137 Male, age 80, left hemisphere 18.1
Parahippocampal cortex
nTPM: 21.6
2622 Female, age 67, right hemisphere 24.9
2532 Female, age 72, left hemisphere 23.0
2693 Female, age 94, both hemispheres 22.9
1850 Male, age 80, both hemispheres 22.7
1933 Female, age 85, both hemispheres 21.5
1990 Female, age 91, right hemisphere 20.8
2245 Female, age 91, both hemispheres 20.6
2250 Female, age 67, right hemisphere 20.4
2018 Male, age 76, both hemispheres 19.9
2692 Male, age 74, both hemispheres 19.5
Perirhinal gyrus
nTPM: 23.0
1841 Female, age 85, right hemisphere 24.7
2521 Female, age 94, right hemisphere 24.7
1794 Male, age 80, right hemisphere 24.0
2848 Male, age 76, right hemisphere 21.2
1847 Female, age 91, left hemisphere 20.4
Subiculum
nTPM: 19.2
1977 Female, age 85, both hemispheres 20.4
2729 Female, age 91, right hemisphere 19.9
2042 Male, age 76, both hemispheres 19.7
2619 Male, age 74, both hemispheres 19.5
1901 Male, age 80, both hemispheres 18.7
2438 Female, age 94, left hemisphere 17.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 11.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 11.9
Samples: 197

Max nTPM: 41.8
Min nTPM: 3.2
Std nTPM: 5.6
Median nTPM: 10.6
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 41.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 33.9
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 30.2
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 26.5
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 26.1
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 25.3
GTEX-ZVZQ-0011-R1a-SM-57WBU 60-69 years, female 22.2
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 21.8
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 21.7
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 21.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 21.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 18.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 18.8
FF:10169-103B7 60 years, female 23.0
FF:10153-102I9 76 years, female 14.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 8.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.6
Samples: 4

Max nTPM: 5.8
Min nTPM: 2.6
Sample A Male 5.8
Sample B Male 5.1
Sample C Female 4.9
Sample D Female 2.6
Hippocampal formation
nTPM: 8.1
Samples: 4

Max nTPM: 11.2
Min nTPM: 5.9
Sample A Male 5.9
Sample B Male 7.0
Sample C Female 8.2
Sample D Female 11.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
68667097 Antisense, RP_050201_01_F01, Mouse strain C57BL/6J (56 days, male) 0.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.