ABOUTMENU
HELP
NEWS
SET
HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni
Consensus:109.1 nTPM
HPA:109.1 nTPM
GTEx:132.3 nTPM
FANTOM5:341.3 Scaled Tags Per Million
Mouse:65.3 nTPM
Allen mouse:12.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA063683Antibody CAB005232
Glial cells HighHigh
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 109.1
Sample id Sample description nTPM
Hippocampus
nTPM: 106.4
1898 Male, age 80, left hemisphere 119.5
2529 Female, age 94, left hemisphere 109.8
1855 Male, age 76, left hemisphere 105.7
2621 Female, age 67, right hemisphere 102.6
1911 Female, age 85, right hemisphere 100.3
2148 Female, age 91, left hemisphere 100.2
Dentate gyrus
nTPM: 108.6
2530 Female, age 94, left hemisphere 131.6
2010 Male, age 76, both hemispheres 117.4
2246 Female, age 85, both hemispheres 102.7
1927 Female, age 91, both hemispheres 101.2
2531 Female, age 67, both hemispheres 100.3
2528 Male, age 74, both hemispheres 98.5
Entorhinal gyrus
nTPM: 107.5
2117 Female, age 91, right hemisphere 114.1
2686 Male, age 75, right hemisphere 109.7
1938 Female, age 85, left hemisphere 109.4
1787 Male, age 76, left hemisphere 107.1
2764 Male, age 80, right hemisphere 104.0
2613 Female, age 94, left hemisphere 100.8
Hippocampus, CA1
nTPM: 107.1
2749 Male, age 80, left hemisphere 121.2
1873 Female, age 85, both hemispheres 108.7
2045 Male, age 76, both hemispheres 102.9
2527 Male, age 74, both hemispheres 101.6
2082 Female, age 91, right hemisphere 101.3
Hippocampus, CA2
nTPM: 108.6
1963 Male, age 80, left hemisphere 123.3
1892 Male, age 76, both hemispheres 113.3
2249 Male, age 74, both hemispheres 105.3
1940 Female, age 85, left hemisphere 104.1
2113 Female, age 91, right hemisphere 103.8
2437 Female, age 94, left hemisphere 101.7
Hippocampus, CA3
nTPM: 104.1
2137 Male, age 80, left hemisphere 117.3
1867 Male, age 76, both hemispheres 109.6
1891 Female, age 85, both hemispheres 109.2
2861 Female, age 67, both hemispheres 99.0
2620 Female, age 94, left hemisphere 95.0
2436 Male, age 74, both hemispheres 94.2
Parahippocampal cortex
nTPM: 102.1
2245 Female, age 91, both hemispheres 111.4
2018 Male, age 76, both hemispheres 107.8
1850 Male, age 80, both hemispheres 107.2
2250 Female, age 67, right hemisphere 106.6
1990 Female, age 91, right hemisphere 105.1
1933 Female, age 85, both hemispheres 102.3
2532 Female, age 72, left hemisphere 101.8
2692 Male, age 74, both hemispheres 97.0
2622 Female, age 67, right hemisphere 93.0
2693 Female, age 94, both hemispheres 88.9
Perirhinal gyrus
nTPM: 102.9
1841 Female, age 85, right hemisphere 106.6
2848 Male, age 76, right hemisphere 106.2
1794 Male, age 80, right hemisphere 103.0
1847 Female, age 91, left hemisphere 101.7
2521 Female, age 94, right hemisphere 97.0
Subiculum
nTPM: 109.1
1901 Male, age 80, both hemispheres 115.2
1977 Female, age 85, both hemispheres 114.5
2438 Female, age 94, left hemisphere 113.4
2042 Male, age 76, both hemispheres 111.8
2729 Female, age 91, right hemisphere 104.7
2619 Male, age 74, both hemispheres 95.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 132.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 132.3
Samples: 197

Max nTPM: 303.6
Min nTPM: 75.4
Std nTPM: 37.7
Median nTPM: 123.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 303.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 299.9
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 282.8
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 257.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 255.4
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 245.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 233.5
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 223.7
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 207.3
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 200.7
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 193.6
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 341.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 341.3
FF:10153-102I9 76 years, female 369.8
FF:10169-103B7 60 years, female 312.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 65.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 64.1
Samples: 4

Max nTPM: 67.3
Min nTPM: 62.6
Sample A Male 62.6
Sample B Male 67.3
Sample C Female 62.9
Sample D Female 63.4
Hippocampal formation
nTPM: 65.3
Samples: 4

Max nTPM: 69.6
Min nTPM: 57.1
Sample A Male 66.1
Sample B Male 69.6
Sample C Female 68.3
Sample D Female 57.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.6
68301831 Antisense, RP_041130_01_H07, Mouse strain C57BL/6J (56 days, male) 12.6

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.