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HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:66.0 nTPM
HPA:66.0 nTPM
GTEx:62.3 nTPM
FANTOM5:152.2 Scaled Tags Per Million
Pig:24.3 nTPM
Mouse:82.5 nTPM
Allen mouse:0.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042809
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 66.0
Sample id Sample description nTPM
Hippocampus
nTPM: 57.9
1898 Male, age 80, left hemisphere 69.2
1855 Male, age 76, left hemisphere 59.9
2148 Female, age 91, left hemisphere 56.6
2621 Female, age 67, right hemisphere 55.3
1911 Female, age 85, right hemisphere 53.3
2529 Female, age 94, left hemisphere 52.9
Dentate gyrus
nTPM: 59.6
1927 Female, age 91, both hemispheres 72.0
2010 Male, age 76, both hemispheres 62.8
2530 Female, age 94, left hemisphere 56.8
2246 Female, age 85, both hemispheres 56.4
2528 Male, age 74, both hemispheres 56.3
2531 Female, age 67, both hemispheres 53.6
Entorhinal gyrus
nTPM: 55.5
1938 Female, age 85, left hemisphere 63.7
2764 Male, age 80, right hemisphere 57.7
1787 Male, age 76, left hemisphere 55.3
2613 Female, age 94, left hemisphere 55.0
2117 Female, age 91, right hemisphere 52.6
2686 Male, age 75, right hemisphere 48.8
Hippocampus, CA1
nTPM: 62.5
2749 Male, age 80, left hemisphere 77.1
1873 Female, age 85, both hemispheres 63.9
2045 Male, age 76, both hemispheres 63.6
2527 Male, age 74, both hemispheres 56.6
2082 Female, age 91, right hemisphere 51.3
Hippocampus, CA2
nTPM: 60.8
1892 Male, age 76, both hemispheres 69.9
1963 Male, age 80, left hemisphere 66.8
2249 Male, age 74, both hemispheres 62.6
1940 Female, age 85, left hemisphere 57.5
2437 Female, age 94, left hemisphere 55.3
2113 Female, age 91, right hemisphere 52.7
Hippocampus, CA3
nTPM: 60.8
2137 Male, age 80, left hemisphere 69.2
2436 Male, age 74, both hemispheres 64.5
1867 Male, age 76, both hemispheres 63.4
2620 Female, age 94, left hemisphere 60.2
1891 Female, age 85, both hemispheres 56.2
2861 Female, age 67, both hemispheres 51.0
Parahippocampal cortex
nTPM: 57.7
1850 Male, age 80, both hemispheres 69.4
1990 Female, age 91, right hemisphere 60.4
1933 Female, age 85, both hemispheres 60.2
2693 Female, age 94, both hemispheres 59.4
2250 Female, age 67, right hemisphere 58.3
2245 Female, age 91, both hemispheres 57.8
2532 Female, age 72, left hemisphere 55.9
2018 Male, age 76, both hemispheres 54.2
2692 Male, age 74, both hemispheres 51.7
2622 Female, age 67, right hemisphere 49.9
Perirhinal gyrus
nTPM: 66.0
1841 Female, age 85, right hemisphere 69.2
1847 Female, age 91, left hemisphere 69.1
1794 Male, age 80, right hemisphere 69.0
2521 Female, age 94, right hemisphere 64.7
2848 Male, age 76, right hemisphere 58.1
Subiculum
nTPM: 55.1
1901 Male, age 80, both hemispheres 59.6
1977 Female, age 85, both hemispheres 56.7
2042 Male, age 76, both hemispheres 54.1
2438 Female, age 94, left hemisphere 53.7
2729 Female, age 91, right hemisphere 53.7
2619 Male, age 74, both hemispheres 52.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 62.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 62.3
Samples: 197

Max nTPM: 198.9
Min nTPM: 28.2
Std nTPM: 19.6
Median nTPM: 60.0
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 198.9
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 118.1
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 103.4
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 99.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 95.8
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 95.4
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 95.4
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 94.6
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 94.4
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 94.0
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 92.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 152.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 152.2
FF:10169-103B7 60 years, female 205.0
FF:10153-102I9 76 years, female 99.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 24.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 24.4
Samples: 4

Max nTPM: 27.3
Min nTPM: 20.9
Sample A Female 23.9
Sample B Female 25.3
Sample C Male 20.9
Sample D Male 27.3
Entorhinal cortex
nTPM: 23.6
Samples: 4

Max nTPM: 24.9
Min nTPM: 22.9
Sample A Female 22.9
Sample B Female 23.5
Sample C Male 24.9
Sample D Male 23.2
Subiculum
nTPM: 23.8
Samples: 4

Max nTPM: 25.0
Min nTPM: 21.9
Sample A Female 24.5
Sample B Female 25.0
Sample C Male 21.9
Sample D Male 23.6
Ventral hippocampus
nTPM: 21.8
Samples: 4

Max nTPM: 23.8
Min nTPM: 18.7
Sample A Female 22.9
Sample B Female 23.8
Sample C Male 18.7
Sample D Male 21.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 82.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 70.1
Samples: 4

Max nTPM: 73.9
Min nTPM: 67.9
Sample A Male 69.0
Sample B Male 69.4
Sample C Female 73.9
Sample D Female 67.9
Hippocampal formation
nTPM: 82.5
Samples: 4

Max nTPM: 86.4
Min nTPM: 73.6
Sample A Male 86.4
Sample B Male 86.2
Sample C Female 83.8
Sample D Female 73.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.6
70195084 Antisense, RP_050517_02_D02, Mouse strain C57BL/6J (56 days, male) 0.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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